Cla013002 (Citrullus lanatus)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Cla013002 T320915_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.837 0.837
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla013002 RWP-RK 591 639

Links

Other RWP-RK family TFs
Other Citrullus lanatus TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000007380 Ailuropoda melanoleuca ENSAMEG00000007380 I 0.000
ENSBTAG00000003465 Bos taurus ENSBTAG00000003465 I 0.000
ENSBTAP00000004507-D52 Bos grunniens ENSBTAP00000004507-D52 I 0.000
ENSCSAG00000019663 Chlorocebus sabaeus ENSCSAG00000019663 I 0.000
ENSMICG00000017854 Microcebus murinus ENSMICG00000017854 I 0.000
ENSMLUG00000014403 Myotis lucifugus ENSMLUG00000014403 I 0.000
ENSMPUG00000019115 Mustela putorius furo ENSMPUG00000019115 I 0.000
ENSNLEG00000019190 Nomascus leucogenys ENSNLEG00000019190 I 0.000
ENSPANG00000012355 Papio anubis ENSPANG00000012355 I 0.000
ENSPPYG00000010492 Pongo abelii ENSPPYG00000010492 I 0.000
ENSTSYG00000003695 Tarsius syrichta ENSTSYG00000003695 I 0.000
ZNF329 Canis familiaris ENSCAFG00000031863 I 0.000
ZNF329 Gorilla gorilla ENSGGOG00000002485 I 0.000
ZNF329 Vicugna pacos ENSVPAG00000010098 I 0.000
ZNF329 Sus scrofa ENSSSCG00000023027 I 0.000
ZNF329 Sorex araneus ENSSARG00000004583 I 0.000
ZNF329 Pteropus vampyrus ENSPVAG00000002937 I 0.000
ZNF329 Pan troglodytes ENSPTRG00000011582 I 0.000
ZNF329 Otolemur garnettii ENSOGAG00000005636 I 0.000
ZNF329 Oryctolagus cuniculus ENSOCUG00000002886 I 0.000
ZNF329 Callithrix jacchus ENSCJAG00000000347 I 0.000
ZNF329 Dasypus novemcinctus ENSDNOG00000007169 I 0.000
ZNF329 Macaca mulatta ENSMMUG00000020504 I 0.000
ZNF329 Equus caballus ENSECAG00000002408 I 0.000
ZNF329 Homo sapiens ENSG00000181894 D 0.000
ZNF329 Loxodonta africana ENSLAFG00000009318 I 0.000