Cagra.1226s0068 (Capsella grandiflora)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Cagra.1226s0068 T321076_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		1.000 1.000
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1226s0068.1.p RWP-RK 592 640

Links

Other RWP-RK family TFs
Other Capsella grandiflora TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB03358.1 Alternaria brassicicola AB03358.1 N 0.000
ACRE_062880 Acremonium chrysogenum ACRE_062880 I 0.000
ada-1 Neurospora crassa NCU00499 D 0.000
ANIA_01536 Aspergillus nidulans CADANIAG00008163 D 0.000
ARB_05846 Arthroderma benhamiae ARB_05846 I 0.000
ATEG_04779 Aspergillus terreus CADATEAG00007874 I 0.000
CADANGAG00013191 Aspergillus niger CADANGAG00013191 I 0.000
CFIO01_10230 Colletotrichum fioriniae CFIO01_10230 I 0.000
CGGC5_7534 Colletotrichum gloeosporioides CGGC5_7534 I 0.000
CH063_11966 Colletotrichum higginsianum CH063_11966 I 0.000
CMQ_48 Grosmannia clavigera CMQ_48 I 0.000
Cob_12403 Colletotrichum orbiculare Cob_12403 I 0.000
COCC4DRAFT_21340 Bipolaris maydis COCC4DRAFT_21340 N 0.000
COCCADRAFT_1690 Bipolaris zeicola COCCADRAFT_1690 N 0.000
COCMIDRAFT_89716 Bipolaris oryzae COCMIDRAFT_89716 N 0.000
COCSADRAFT_92985 Bipolaris sorokiniana COCSADRAFT_92985 N 0.000
COCVIDRAFT_94504 Bipolaris victoriae COCVIDRAFT_94504 N 0.000
CSUB01_03595 Colletotrichum sublineola CSUB01_03595 I 0.000
CTHT_0003390 Chaetomium thermophilum CTHT_0003390 I 0.000
estExt_fgenesh1_pg.C_30275 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_30275 N 0.000
estExt_fgenesh3_kg.C_40162 Neurospora discreta estExt_fgenesh3_kg.C_40162 I 0.000
FFUJ_01033 Fusarium fujikuroi FFUJ_01033 I 0.000
fgenesh1_pg.C_scaffold_5000767 Cryphonectria parasitica fgenesh1_pg.C_scaffold_5000767 I 0.000
fgenesh1_pm.sca_1_chr1_3_0000259 Nectria haematococca fgenesh1_pm.sca_1_chr1_3_0000259 I 0.000
FGRRES_00515 Fusarium graminearum FGRRES_00515 I 0.000
FOXG_00543 Fusarium oxysporum FOXG_00543 I 0.000
FPSE_04421 Fusarium pseudograminearum FPSE_04421 I 0.000
FVEG_00971 Fusarium verticillioides FVEG_00971 I 0.000
GLRG_01353 Colletotrichum graminicola GLRG_01353 I 0.000
H101_07631 Trichophyton interdigitale H101_07631 I 0.000
H102_02966 Trichophyton rubrum H102_02966 I 0.000
H105_02985 Trichophyton soudanense H105_02985 I 0.000
HMPREF1624_07612 Sporothrix schenckii HMPREF1624_07612 I 0.000
MAC_02987 Metarhizium acridum MAC_02987 I 0.000
MAJ_00756 Metarhizium majus MAJ_00756 I 0.000
MAM_01947 Metarhizium album MAM_01947 I 0.000
MANI_001414 Metarhizium anisopliae MANI_001414 I 0.000
MBR_03350 Metarhizium brunneum MBR_03350 I 0.000
MCYG_02590 Microsporum canis MCYG_02590 I 0.000
MCYG_02590 Arthroderma otae MCYG_02590 I 0.000
MGU_02844 Metarhizium guizhouense MGU_02844 I 0.000
MYCTH_2297012 Myceliophthora thermophila MYCTH_2297012 I 0.000
NechaG90126 Fusarium solani NechaG90126 I 0.000
NEUTE1DRAFT_119203 Neurospora tetrasperma NEUTE1DRAFT_119203 I 0.000
PDE_06458 Penicillium oxalicum PDE_06458 I 0.000
PFICI_01318 Pestalotiopsis fici PFICI_01318 I 0.000
PMAA_009160 Penicillium marneffei PMAA_009160 I 0.000
PMAA_009160 Talaromyces marneffei PMAA_009160 I 0.000
PODANS_1_17610 Podospora anserina PODANS_1_17610 I 0.000
PTRG_07536 Pyrenophora triticirepentis PTRG_07536 N 0.000
PTT_12768 Pyrenophora teres PTT_12768 N 0.000
PVAR5_2855 Byssochlamys spectabilis PVAR5_2855 I 0.000
SETTUDRAFT_28486 Setosphaeria turcica SETTUDRAFT_28486 N 0.000
SPBR_06799 Sporothrix brasiliensis SPBR_06799 I 0.000
TEQG_05652 Trichophyton equinum TEQG_05652 I 0.000
TESG_01622 Trichophyton tonsurans TESG_01622 I 0.000
TRIATDRAFT_182347 Trichoderma atroviride TRIATDRAFT_182347 I 0.000
TRIREDRAFT_73654 Trichoderma reesei TRIREDRAFT_73654 I 0.000
TRIVIDRAFT_212339 Trichoderma virens TRIVIDRAFT_212339 I 0.000
TRV_01026 Trichophyton verrucosum TRV_01026 I 0.000
TSTA_058790 Talaromyces stipitatus TSTA_058790 I 0.000
UCRPA7_6727 Togninia minima UCRPA7_6727 I 0.000
UV8b_4299 Ustilaginoidea virens UV8b_4299 I 0.000
VDBG_04532 Verticillium alfalfae VDBG_04532 I 0.000
VDBG_04532 Verticillium albo atrum VDBG_04532 I 0.000
X797_004019 Metarhizium robertsii X797_004019 I 0.000