CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EuGene.0200010725
(
Micromonas sp RCC299
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02042 (RWP-RK)
IPR003035
EuGene.0200010725
T321122_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
56348
RWP-RK
678
725
GITLSMLSQHFNKHLKDAAKDLGVGSTTLKRICRHFGIARWPRRSLKS
Links
Other
RWP-RK
family TFs
Other
Micromonas sp RCC299
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EuGene.0000140102
Micromonas pusilla
EuGene.0000140102
N
0.833
EuGene.1600010216
Micromonas sp RCC299
EuGene.1600010216
N
0.875
fgenesh1_pg.C_Chr_07.0001000008
Ostreococcus tauri
fgenesh1_pg.C_Chr_07.0001000008
N
0.750
fgenesh1_pg.C_scaffold_4000466
Micromonas pusilla
fgenesh1_pg.C_scaffold_4000466
N
0.771
fgenesh1_pg.C_scaffold_4000478
Micromonas pusilla
fgenesh1_pg.C_scaffold_4000478
N
0.812
fgenesh1_pm.chr_6_#_332
Ostreococcus RCC809
fgenesh1_pm.chr_6_#_332
N
0.771
OSTLU_24740
Ostreococcus lucimarinus
OSTLU_24740
N
0.771