Pavir.J13146 (Panicum virgatum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Pavir.J13146 T321231_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.755 0.755
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.755 0.755
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J13146.1.p RWP-RK 123 171

Links

Other RWP-RK family TFs
Other Panicum virgatum TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10009121 Chelonia mydas Cmyd_10009121 N 0.000
ENSAMEG00000007185 Ailuropoda melanoleuca ENSAMEG00000007185 N 0.000
ENSAMXG00000006287 Astyanax mexicanus ENSAMXG00000006287 N 0.000
ENSCSAG00000015620 Chlorocebus sabaeus ENSCSAG00000015620 N 0.000
ENSFALG00000010297 Ficedula albicollis ENSFALG00000010297 N 0.000
ENSGMOG00000007538 Gadus morhua ENSGMOG00000007538 N 0.000
ENSLACG00000013704 Latimeria chalumnae ENSLACG00000013704 N 0.000
ENSLOCG00000011104 Lepisosteus oculatus ENSLOCG00000011104 N 0.000
ENSMEUG00000015869 Macropus eugenii ENSMEUG00000015869 N 0.000
ENSMPUG00000014399 Mustela putorius furo ENSMPUG00000014399 N 0.000
ENSNLEG00000004555 Nomascus leucogenys ENSNLEG00000004555 N 0.000
ENSOARG00000005075 Ovis aries ENSOARG00000005075 N 0.000
ENSONIG00000015237 Oreochromis niloticus ENSONIG00000015237 N 0.000
ENSP00000313158 Macaca fascicularis ENSP00000313158 N 0.000
ENSP00000313158-D1 Bos grunniens ENSP00000313158-D1 N 0.000
ENSPANG00000023914 Papio anubis ENSPANG00000023914 N 0.000
ENSPFOG00000007607 Poecilia formosa ENSPFOG00000007607 N 0.000
ENSPPYG00000015544 Pongo abelii ENSPPYG00000015544 N 0.000
ENSPSIG00000014530 Pelodiscus sinensis ENSPSIG00000014530 N 0.000
ENSSHAG00000004351 Sarcophilus harrisii ENSSHAG00000004351 N 0.000
ENSSTOG00000029102 Ictidomys tridecemlineatus ENSSTOG00000029102 N 0.000
ENSXMAG00000016095 Xiphophorus maculatus ENSXMAG00000016095 N 0.000
Myotis_brandtii_ZNF366_10035915 Myotis brandtii Myotis_brandtii_ZNF366_10035915 N 0.000
Ogr16419 Ophisaurus gracilis Ogr16419 N 0.000
Pvit_17551 Pogona vitticeps Pvit_17551 N 0.000
Zfp366 Mus musculus ENSMUSG00000050919 N 0.000
Zfp366 Rattus norvegicus ENSRNOG00000017249 N 0.000
Zfp366 Dipodomys ordii ENSDORG00000000338 N 0.000
ZNF366 Taeniopygia guttata ENSTGUG00000005717 N 0.000
ZNF366 Sus scrofa ENSSSCG00000016976 N 0.000
znf366 Tetraodon nigroviridis ENSTNIG00000016682 N 0.000
znf366 Xenopus tropicalis XB-GENE-6464910 N 0.000
ZNF366 Sorex araneus ENSSARG00000010412 N 0.000
znf366 Takifugu rubripes ENSTRUG00000015639 N 0.000
ZNF366 Tursiops truncatus ENSTTRG00000011858 N 0.000
ZNF366 Canis familiaris ENSCAFG00000007986 N 0.000
ZNF366 Felis catus ENSFCAG00000005456 N 0.000
ZNF366 Monodelphis domestica ENSMODG00000001702 N 0.000
ZNF366 Homo sapiens ENSG00000178175 N 0.000
znf366 Gasterosteus aculeatus ENSGACG00000006566 N 0.000
ZNF366 Gallus gallus ENSGALG00000015008 N 0.000
ZNF366 Gorilla gorilla ENSGGOG00000004981 N 0.000
ZNF366 Equus caballus ENSECAG00000006723 N 0.000
ZNF366 Loxodonta africana ENSLAFG00000030138 N 0.000
ZNF366 Dasypus novemcinctus ENSDNOG00000046166 N 0.000
znf366 Danio rerio ENSDARG00000040116 N 0.000
ZNF366 Pteropus vampyrus ENSPVAG00000010937 N 0.000
ZNF366 Cavia porcellus ENSCPOG00000007542 N 0.000
ZNF366 Callithrix jacchus ENSCJAG00000016387 N 0.000
ZNF366 Ornithorhynchus anatinus ENSOANG00000015788 N 0.000
ZNF366 Anolis carolinensis ENSACAG00000009713 N 0.000
ZNF366 Oryctolagus cuniculus ENSOCUG00000004571 N 0.000
ZNF366 Otolemur garnettii ENSOGAG00000008393 N 0.000
znf366 Oryzias latipes ENSORLG00000003805 N 0.000
ZNF366 Pan troglodytes ENSPTRG00000016969 N 0.000