CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo6g067310
(
Brassica oleracea
)
S1FA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04689 (S1FA)
IPR006779
Bo6g067310
T321351_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
S1FA3
M07252_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
AT3G09735_col_a
0.758
0.758
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo6g067310.1
S1FA
11
76
AAEAKGLNPGLIVLLVVGGPLVVFLVANYVMYVYAQKNLPPRKKKPVSKKKLKREKLKQGVPVPGE
Links
Other
S1FA
family TFs
Other
Brassica oleracea
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MAC_07212
Metarhizium acridum
MAC_07212
N
0.000
MAJ_07274
Metarhizium majus
MAJ_07274
N
0.000
TRIATDRAFT_139368
Trichoderma atroviride
TRIATDRAFT_139368
N
0.000
X797_008902
Metarhizium robertsii
X797_008902
N
0.000