Bra006994 (Brassica rapa)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 Bra006994 T321355_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra006994.1-P S1FA 11 76

Links

Other S1FA family TFs
Other Brassica rapa TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R002601 Aptenodytes forsteri Afo_R002601 N 0.000
Alligator_sinensis_CCG009248.1 Alligator sinensis Alligator_sinensis_CCG009248.1 N 0.000
Brh_R006725 Buceros rhinoceros Brh_R006725 N 0.000
Cmyd_10007742 Chelonia mydas Cmyd_10007742 N 0.000
ENSACAG00000007731 Anolis carolinensis ENSACAG00000007731 N 0.000
ENSAMEG00000019898 Ailuropoda melanoleuca ENSAMEG00000019898 N 0.000
ENSAMXG00000012827 Astyanax mexicanus ENSAMXG00000012827 N 0.000
ENSAPLG00000002179 Anas platyrhynchos ENSAPLG00000002179 N 0.000
ENSFALG00000007449 Ficedula albicollis ENSFALG00000007449 N 0.000
ENSGALG00000005975 Gallus gallus ENSGALG00000005975 N 0.000
ENSLACG00000016046 Latimeria chalumnae ENSLACG00000016046 N 0.000
ENSLOCG00000003895 Lepisosteus oculatus ENSLOCG00000003895 N 0.000
ENSMODG00000025038 Monodelphis domestica ENSMODG00000025038 N 0.000
ENSNLEG00000015447 Nomascus leucogenys ENSNLEG00000015447 N 0.000
ENSONIG00000009552 Oreochromis niloticus ENSONIG00000009552 N 0.000
ENSP00000379054 Macaca fascicularis ENSP00000379054 N 0.000
ENSP00000379054-D1 Bos grunniens ENSP00000379054-D1 N 0.000
ENSPFOG00000004161 Poecilia formosa ENSPFOG00000004161 N 0.000
ENSSHAG00000015538 Sarcophilus harrisii ENSSHAG00000015538 N 0.000
ENSSSCG00000010373 Sus scrofa ENSSSCG00000010373 N 0.000
ENSSTOG00000015147 Ictidomys tridecemlineatus ENSSTOG00000015147 N 0.000
ENSTGUG00000008050 Taeniopygia guttata ENSTGUG00000008050 N 0.000
ENSXMAG00000014518 Xiphophorus maculatus ENSXMAG00000014518 N 0.000
Gfo_R002431 Geospiza fortis Gfo_R002431 N 0.000
Myotis_brandtii_ZNF488_10008743 Myotis brandtii Myotis_brandtii_ZNF488_10008743 N 0.000
prdm8 Tetraodon nigroviridis ENSTNIG00000016524 N 0.000
prdm8 Gasterosteus aculeatus ENSGACG00000007142 N 0.000
prdm8 Takifugu rubripes ENSTRUG00000012560 N 0.000
prdm8 Oryzias latipes ENSORLG00000008745 N 0.000
ZNF488 Myotis lucifugus ENSMLUG00000030552 N 0.000
ZNF488 Tupaia belangeri ENSTBEG00000016364 N 0.000
ZNF488 Homo sapiens ENSG00000265763 N 0.000
ZNF488 Equus caballus ENSECAG00000004188 N 0.000
ZNF488 Cavia porcellus ENSCPOG00000000536 N 0.000
ZNF488 Meleagris gallopavo ENSMGAG00000016885 N 0.000
ZNF488 Otolemur garnettii ENSOGAG00000001742 N 0.000
ZNF488 Ornithorhynchus anatinus ENSOANG00000015412 N 0.000