CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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deaf1
(
Oryzias latipes
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
ENSORLG00000019407
T321848_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DEAF1
M11266_2.00
Pan troglodytes
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_01
0.944
0.763
DEAF1
M11267_2.00
Pan troglodytes
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_02
0.944
0.763
For this family, TFs with SR scores >
0.843
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000024165
SAND
147
222
SVYNNELPVRCRNTSGVLHKLRLGSGGKGRCIKHNQQWFTPTEFEALSGRASSKDWKRSIRYAGRPLLCLIQERIL
Links
Other
SAND
family TFs
Other
Oryzias latipes
TFs
80 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_014390
Acremonium chrysogenum
ACRE_014390
N
BBA_01626
Beauveria bassiana
BBA_01626
N
CCM_00106
Cordyceps militaris
CCM_00106
N
CFIO01_08383
Colletotrichum fioriniae
CFIO01_08383
N
CGGC5_8876
Colletotrichum gloeosporioides
CGGC5_8876
N
CH063_10454
Colletotrichum higginsianum
CH063_10454
N
Cob_13289
Colletotrichum orbiculare
Cob_13289
N
CPUR_01633
Claviceps purpurea
CPUR_01633
N
CSUB01_06780
Colletotrichum sublineola
CSUB01_06780
N
e_gw1.4.942.1
Cryphonectria parasitica
e_gw1.4.942.1
N
F503_04232
Ophiostoma piceae uamh
F503_04232
N
fgenesh1_pg.sca_1_chr1_3_0000989
Nectria haematococca
fgenesh1_pg.sca_1_chr1_3_0000989
N
FGRRES_00750
Fusarium graminearum
FGRRES_00750
N
FOXG_01081
Fusarium oxysporum
FOXG_01081
N
FPSE_01269
Fusarium pseudograminearum
FPSE_01269
N
FVEG_00433
Fusarium verticillioides
FVEG_00433
N
GGTG_07801
Gaeumannomyces graminis
GGTG_07801
N
GLRG_00605
Colletotrichum graminicola
GLRG_00605
N
HMPREF1624_07505
Sporothrix schenckii
HMPREF1624_07505
N
MAC_05157
Metarhizium acridum
MAC_05157
N
MAJ_06003
Metarhizium majus
MAJ_06003
N
MAM_06097
Metarhizium album
MAM_06097
N
MANI_025150
Metarhizium anisopliae
MANI_025150
N
MBR_00240
Metarhizium brunneum
MBR_00240
N
MGU_08133
Metarhizium guizhouense
MGU_08133
N
NechaG75378
Fusarium solani
NechaG75378
N
OCS_04926
Ophiocordyceps sinensis
OCS_04926
N
PFICI_06254
Pestalotiopsis fici
PFICI_06254
N
SAPIO_CDS5481
Scedosporium apiospermum
SAPIO_CDS5481
N
SPBR_07989
Sporothrix brasiliensis
SPBR_07989
N
TRIATDRAFT_9815
Trichoderma atroviride
TRIATDRAFT_9815
N
TRIREDRAFT_43269
Trichoderma reesei
TRIREDRAFT_43269
N
TRIVIDRAFT_19860
Trichoderma virens
TRIVIDRAFT_19860
N
UCRPA7_6169
Togninia minima
UCRPA7_6169
N
VDBG_07369
Verticillium alfalfae
VDBG_07369
N
VDBG_07369
Verticillium albo atrum
VDBG_07369
N
VHEMI05051
Torrubiella hemipterigena
VHEMI05051
N
X797_002594
Metarhizium robertsii
X797_002594
N