CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Deaf1
(
Rattus norvegicus
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
ENSRNOG00000017960
T321900_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DEAF1
M11266_2.00
Pan troglodytes
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_01
0.993
0.987
DEAF1
M11267_2.00
Pan troglodytes
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_02
0.993
0.987
For this family, TFs with SR scores >
0.843
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000046656
SAND
197
272
SVYDSELPVRCRNISGTLYKSRLGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKRSIRYAGRPLQCLIQDGIL
Links
Other
SAND
family TFs
Other
Rattus norvegicus
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_080110
Acremonium chrysogenum
ACRE_080110
I
BBA_00844
Beauveria bassiana
BBA_00844
I
Bcin02g03240
Botrytis cinerea
Bcin02g03240
I
CPUR_06716
Claviceps purpurea
CPUR_06716
I
CTHT_0065600
Chaetomium thermophilum
CTHT_0065600
N
estExt_fgenesh2_pg.C_10626
Neurospora discreta
estExt_fgenesh2_pg.C_10626
I
GGTG_00491
Gaeumannomyces graminis
GGTG_00491
I
GMDG_03522
Pseudogymnoascus destructans
GMDG_03522
I
HMPREF1624_00394
Sporothrix schenckii
HMPREF1624_00394
I
MAJ_01995
Metarhizium majus
MAJ_01995
I
MAM_07515
Metarhizium album
MAM_07515
I
MANI_016433
Metarhizium anisopliae
MANI_016433
I
MBM_08507
Marssonina brunnea
MBM_08507
I
MBR_03822
Metarhizium brunneum
MBR_03822
I
MGU_05879
Metarhizium guizhouense
MGU_05879
I
NCU01386
Neurospora crassa
NCU01386
D
NEUTE1DRAFT_119830
Neurospora tetrasperma
NEUTE1DRAFT_119830
I
OIDMADRAFT_165781
Oidiodendron maius
OIDMADRAFT_165781
I
SBOR_3407
Sclerotinia borealis
SBOR_3407
I
SMAC_08362
Sordaria macrospora
SMAC_08362
I
SPBR_06705
Sporothrix brasiliensis
SPBR_06705
I
SS1G_01733
Sclerotinia sclerotiorum
SS1G_01733
I
THITE_2107154
Thielavia terrestris
THITE_2107154
N
UV8b_2421
Ustilaginoidea virens
UV8b_2421
I
V499_06325
Pseudogymnoascus pannorum
V499_06325
I
VDAG_08406
Verticillium dahliae
VDAG_08406
I
X797_010922
Metarhizium robertsii
X797_010922
I
X797_011329
Metarhizium robertsii
X797_011329
I
X797_012204
Metarhizium robertsii
X797_012204
I