GSMUA_Achr3G11170_001 (Musa acuminata)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GSMUA_Achr3G11170_001 T322645_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.937 0.792
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.918 0.708
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.913 0.708
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.913 0.708
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.913 0.708
SPL4
M02472_2.00 		Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN		 PBM
Weirauch et al.(2014)
pTH7408 		0.889 0.653
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P11170_001 SBP 43 114

Links

Other SBP family TFs
Other Musa acuminata TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAG00000031741 Bos taurus ENSBTAG00000031741 I
ENSBTAG00000034597 Bos taurus ENSBTAG00000034597 I
ENSBTAP00000031693-D1 Bos grunniens ENSBTAP00000031693-D1 I
ENSCSAG00000019088 Chlorocebus sabaeus ENSCSAG00000019088 I
ENSMICG00000017437 Microcebus murinus ENSMICG00000017437 I
ENSOARG00000018679 Ovis aries ENSOARG00000018679 I
ENSOARG00000020046 Ovis aries ENSOARG00000020046 I
ENSP00000419728 Macaca fascicularis ENSP00000419728 I
ENSPPYG00000016336 Pongo abelii ENSPPYG00000016336 I
Zfp322a Rattus norvegicus ENSRNOG00000017318 I
ZNF322 Gorilla gorilla ENSGGOG00000026339 I
ZNF322 Homo sapiens ENSG00000181315 D
ZNF322 Macaca mulatta ENSMMUG00000017480 I
ZNF322 Equus caballus ENSECAG00000000889 I
ZNF322 Dasypus novemcinctus ENSDNOG00000015534 I
ZNF322 Procavia capensis ENSPCAG00000014729 I
ZNF322 Pan troglodytes ENSPTRG00000017837 I
ZNF322 Sus scrofa ENSSSCG00000001156 I
ZNF322 Tupaia belangeri ENSTBEG00000012598 I
ZNF322 Callithrix jacchus ENSCJAG00000011175 I
ZNF322 Canis familiaris ENSCAFG00000030701 I