CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OBART06G23820
(
Oryza barthii
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03110 (SBP)
IPR004333
OBART06G23820
T322779_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART06G23820.1
SBP
61
135
CQVEGCGLELGGYKEYYRKHRVCEPHTKCLRVVVAGQDRRFCQQCSRFHAPSEFDQEKRSCRRRLSDHNARRRKP
Links
Other
SBP
family TFs
Other
Oryza barthii
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.3.305.1
Phytophthora capsici
e_gw1.3.305.1
N
0.000
F443_05618
Phytophthora parasitica
F443_05618
N
0.000
fgenesh_scip_prom.28083.9880
Phytophthora lateralis
fgenesh_scip_prom.28083.9880
N
0.000
fgenesh_scip_prom.46568.10844
Phytophthora kernoviae
fgenesh_scip_prom.46568.10844
N
0.000
maker-pag1_scaffold_104-snap-gene-0.37
Pythium aphanidermatum
maker-pag1_scaffold_104-snap-gene-0.37
N
0.000
maker-par_contig_359-snap-gene-0.8
Pythium arrhenomanes
maker-par_contig_359-snap-gene-0.8
N
0.000
maker-pir_contig_315-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_315-fgenesh-gene-0.0
N
0.000
maker-piw_contig_348-snap-gene-0.7
Pythium iwayamai
maker-piw_contig_348-snap-gene-0.7
N
0.000
maker-pve_contig_589-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_589-fgenesh-gene-0.0
N
0.000
Phyra74345
Phytophthora ramorum
Phyra74345
N
0.000
Phyra84059
Phytophthora ramorum
Phyra84059
N
0.000
Physo127312
Phytophthora sojae
Physo127312
N
0.000
PITG_01135
Phytophthora infestans
PITG_01135
N
0.000
PYU1_G001938
Pythium ultimum
PYU1_G001938
N
0.000
SPRG_07347
Saprolegnia parasitica
SPRG_07347
N
0.000