PK19500.1 (Cannabis sativa)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 PK19500.1 T323704_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.969 0.800
AT1G76580
M02473_2.00 		Arabidopsis thaliana
NNNRTAYNNN
NNNRTAYNNN		 PBM
Weirauch et al.(2014)
pTH8668 		0.899 0.693
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.896 0.680
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.896 0.680
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.896 0.680
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.889 0.733
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK19500.1 SBP 50 124

Links

Other SBP family TFs
Other Cannabis sativa TFs

281 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28644.m000942 Ricinus communis 28644.m000942 N
29726.m004013 Ricinus communis 29726.m004013 I
29792.m000600 Ricinus communis 29792.m000600 I
30128.m008571 Ricinus communis 30128.m008571 I
30131.m006951 Ricinus communis 30131.m006951 I
AMTR_s00010p00240320 Amborella trichopoda AMTR_s00010p00240320 I
AMTR_s00016p00238800 Amborella trichopoda AMTR_s00016p00238800 I
AMTR_s00049p00214620 Amborella trichopoda AMTR_s00049p00214620 I
AMTR_s00057p00191330 Amborella trichopoda AMTR_s00057p00191330 I
Aquca_011_00500 Aquilegia coerulea Aquca_011_00500 I
Aquca_013_00162 Aquilegia coerulea Aquca_013_00162 I
Aquca_015_00126 Aquilegia coerulea Aquca_015_00126 I
Aquca_017_00248 Aquilegia coerulea Aquca_017_00248 I
Aquca_022_00029 Aquilegia coerulea Aquca_022_00029 I
BGIOSGA006366 Oryza indica BGIOSGA006366 I
BGIOSGA016321 Oryza indica BGIOSGA016321 I
BGIOSGA023741 Oryza indica BGIOSGA023741 I
BGIOSGA027571 Oryza indica BGIOSGA027571 I
Bo2g011600 Brassica oleracea Bo2g011600 I
Bo2g016580 Brassica oleracea Bo2g016580 I
Bo3g009410 Brassica oleracea Bo3g009410 I
Bo3g013220 Brassica oleracea Bo3g013220 I
Bo3g140080 Brassica oleracea Bo3g140080 I
Bo3g143080 Brassica oleracea Bo3g143080 I
Bo4g009400 Brassica oleracea Bo4g009400 I
Bo5g054550 Brassica oleracea Bo5g054550 I
Bo7g048420 Brassica oleracea Bo7g048420 I
Bo7g050300 Brassica oleracea Bo7g050300 I
Bo8g107890 Brassica oleracea Bo8g107890 I
Bo9g154770 Brassica oleracea Bo9g154770 I
Bo9g166320 Brassica oleracea Bo9g166320 I
Bostr.13671s0161 Boechera stricta Bostr.13671s0161 I
Bostr.26527s0355 Boechera stricta Bostr.26527s0355 I
Bostr.2902s0126 Boechera stricta Bostr.2902s0126 I
Bra002168 Brassica rapa Bra002168 I
Bra004548 Brassica rapa Bra004548 I
Bra006222 Brassica rapa Bra006222 I
Bra006466 Brassica rapa Bra006466 I
Bra008793 Brassica rapa Bra008793 I
Bra010901 Brassica rapa Bra010901 I
Bra010972 Brassica rapa Bra010972 I
Bra012499 Brassica rapa Bra012499 I
Bra023440 Brassica rapa Bra023440 I
Bra023684 Brassica rapa Bra023684 I
Bra026949 Brassica rapa Bra026949 I
Bra030076 Brassica rapa Bra030076 I
BRADI1G18580 Brachypodium distachyon BRADI1G18580 I
BRADI3G44470 Brachypodium distachyon BRADI3G44470 I
Cagra.0568s0211 Capsella grandiflora Cagra.0568s0211 I
Cagra.0712s0022 Capsella grandiflora Cagra.0712s0022 I
Cagra.1822s0047 Capsella grandiflora Cagra.1822s0047 I
Cagra.5588s0020 Capsella grandiflora Cagra.5588s0020 I
Carubv10002480m.g Capsella rubella Carubv10002480m.g I
Carubv10002663m.g Capsella rubella Carubv10002663m.g I
Carubv10012143m.g Capsella rubella Carubv10012143m.g I
Carubv10012659m.g Capsella rubella Carubv10012659m.g I
Carubv10028227m.g Capsella rubella Carubv10028227m.g I
cassava11359.m1 Manihot esculenta cassava11359.m1 I
cassava11599.m1 Manihot esculenta cassava11599.m1 I
cassava21477.m1 Manihot esculenta cassava21477.m1 I
cassava21524.m1 Manihot esculenta cassava21524.m1 I
cassava21525.m1 Manihot esculenta cassava21525.m1 I
cassava21600.m1 Manihot esculenta cassava21600.m1 I
cassava32131.m1 Manihot esculenta cassava32131.m1 I
cassava32306.m1 Manihot esculenta cassava32306.m1 I
cassava46974.m1 Manihot esculenta cassava46974.m1 I
Ca_00514 Cicer arietinum Ca_00514 I
Ca_06835 Cicer arietinum Ca_06835 I
Ca_08291 Cicer arietinum Ca_08291 I
Ca_18127 Cicer arietinum Ca_18127 I
chr1.CM0222.280.nd Lotus japonicus chr1.CM0222.280.nd I
Ciclev10002183m.g Citrus clementina Ciclev10002183m.g I
Ciclev10006460m.g Citrus clementina Ciclev10006460m.g I
Ciclev10006861m.g Citrus clementina Ciclev10006861m.g I
Ciclev10017494m.g Citrus clementina Ciclev10017494m.g I
Ciclev10031612m.g Citrus clementina Ciclev10031612m.g I
Cla009214 Citrullus lanatus Cla009214 I
Cla010206 Citrullus lanatus Cla010206 I
Cla023087 Citrullus lanatus Cla023087 I
Cucsa.095860 Cucumis sativus Cucsa.095860 I
Cucsa.201950 Cucumis sativus Cucsa.201950 I
Cucsa.253400 Cucumis sativus Cucsa.253400 I
Cucsa.286530 Cucumis sativus Cucsa.286530 I
Cucsa.300100 Cucumis sativus Cucsa.300100 I
Cucsa.394520 Cucumis sativus Cucsa.394520 I
DRNL Vitis vinifera VIT_00s0291g00030 I
ERF086 Arabidopsis thaliana AT5G18560 D
ERF087 Arabidopsis thaliana AT1G28160 D
ERF088 Arabidopsis thaliana AT1G12890 I
Eucgr.B03565 Eucalyptus grandis Eucgr.B03565 I
Eucgr.H02495 Eucalyptus grandis Eucgr.H02495 I
Eucgr.H03870 Eucalyptus grandis Eucgr.H03870 I
Eucgr.I01576 Eucalyptus grandis Eucgr.I01576 I
evm.TU.supercontig_16.148 Carica papaya evm.TU.supercontig_16.148 I
evm.TU.supercontig_33.29 Carica papaya evm.TU.supercontig_33.29 I
evm.TU.supercontig_70.47 Carica papaya evm.TU.supercontig_70.47 I
fgenesh2_kg.1__1396__AT1G12890.1 Arabidopsis lyrata fgenesh2_kg.1__1396__AT1G12890.1 I
fgenesh2_kg.1__2978__AT1G28160.1 Arabidopsis lyrata fgenesh2_kg.1__2978__AT1G28160.1 I
gene06790-v1.0-hybrid Fragaria vesca gene06790-v1.0-hybrid I
gene22175-v1.0-hybrid Fragaria vesca gene22175-v1.0-hybrid I
gene22872-v1.0-hybrid Fragaria vesca gene22872-v1.0-hybrid I
GLYMA01G03110 Glycine max GLYMA01G03110 I
GLYMA02G04460 Glycine max GLYMA02G04460 I
GLYMA02G07460 Glycine max GLYMA02G07460 I
GLYMA07G37990 Glycine max GLYMA07G37990 I
GLYMA08G38800 Glycine max GLYMA08G38800 I
GLYMA10G36300 Glycine max GLYMA10G36300 I
GLYMA13G28810 Glycine max GLYMA13G28810 I
GLYMA15G10245 Glycine max GLYMA15G10245 I
GLYMA16G05070 Glycine max GLYMA16G05070 I
GLYMA16G26460 Glycine max GLYMA16G26460 I
GLYMA17G02711 Glycine max GLYMA17G02711 I
GLYMA18G20962 Glycine max GLYMA18G20962 I
GLYMA20G31293 Glycine max GLYMA20G31293 I
Gorai.002G187500 Gossypium raimondii Gorai.002G187500 I
Gorai.005G058700 Gossypium raimondii Gorai.005G058700 I
Gorai.005G177900 Gossypium raimondii Gorai.005G177900 I
Gorai.005G197800 Gossypium raimondii Gorai.005G197800 I
Gorai.006G264300 Gossypium raimondii Gorai.006G264300 I
Gorai.008G123400 Gossypium raimondii Gorai.008G123400 I
Gorai.008G155600 Gossypium raimondii Gorai.008G155600 I
Gorai.008G161000 Gossypium raimondii Gorai.008G161000 I
Gorai.011G188200 Gossypium raimondii Gorai.011G188200 I
GRMZM2G009598 Zea mays GRMZM2G009598 I
GRMZM2G023708 Zea mays GRMZM2G023708 I
GRMZM2G047999 Zea mays GRMZM2G047999 I
GRMZM2G055070 Zea mays GRMZM2G055070 I
GRMZM2G079825 Zea mays GRMZM2G079825 I
GRMZM2G307119 Zea mays GRMZM2G307119 I
GRMZM2G458437 Zea mays GRMZM2G458437 I
GSMUA_Achr10G17370_001 Musa acuminata GSMUA_Achr10G17370_001 I
GSMUA_Achr11G19880_001 Musa acuminata GSMUA_Achr11G19880_001 I
GSMUA_Achr3G02360_001 Musa acuminata GSMUA_Achr3G02360_001 I
GSMUA_Achr6G35320_001 Musa acuminata GSMUA_Achr6G35320_001 I
GSMUA_Achr7G17910_001 Musa acuminata GSMUA_Achr7G17910_001 I
GSMUA_Achr7G21980_001 Musa acuminata GSMUA_Achr7G21980_001 I
GSMUA_Achr8G01690_001 Musa acuminata GSMUA_Achr8G01690_001 I
GSMUA_Achr8G30180_001 Musa acuminata GSMUA_Achr8G30180_001 I
LEP Arabidopsis thaliana AT5G13910 D
LEP Arabidopsis lyrata scaffold_601402.1 I
LEP Vitis vinifera VIT_14s0068g00860 I
LjT18C07.30.nc Lotus japonicus LjT18C07.30.nc I
LPERR02G14670 Leersia perrieri LPERR02G14670 I
LPERR04G07940 Leersia perrieri LPERR04G07940 I
LPERR07G22580 Leersia perrieri LPERR07G22580 I
Lus10005281.g Linum usitatissimum Lus10005281.g I
Lus10013958.g Linum usitatissimum Lus10013958.g I
Lus10033963.g Linum usitatissimum Lus10033963.g I
Lus10035129.g Linum usitatissimum Lus10035129.g I
MDP0000123172 Malus domestica MDP0000123172 I
MDP0000190504 Malus domestica MDP0000190504 I
MDP0000263008 Malus domestica MDP0000263008 I
MDP0000264124 Malus domestica MDP0000264124 I
MDP0000467753 Malus domestica MDP0000467753 I
MDP0000778140 Malus domestica MDP0000778140 I
mgf019421m Mimulus guttatus mgf019421m I
mgf019807m Mimulus guttatus mgf019807m I
mgf025433m Mimulus guttatus mgf025433m I
MLOC_73522 Hordeum vulgare MLOC_73522 I
MTR_1g097190 Medicago truncatula MTR_1g097190 I
MTR_4g119270 Medicago truncatula MTR_4g119270 I
MTR_5g032820 Medicago truncatula MTR_5g032820 I
MTR_7g084370 Medicago truncatula MTR_7g084370 I
MTR_8g069360 Medicago truncatula MTR_8g069360 I
OB02G26200 Oryza brachyantha OB02G26200 I
OB04G18290 Oryza brachyantha OB04G18290 I
OBART07G25780 Oryza barthii OBART07G25780 I
OGLUM01G08910 Oryza glumaepatula OGLUM01G08910 I
OGLUM02G18720 Oryza glumaepatula OGLUM02G18720 I
OGLUM04G10880 Oryza glumaepatula OGLUM04G10880 I
OGLUM07G25800 Oryza glumaepatula OGLUM07G25800 I
OGLUM08G04690 Oryza glumaepatula OGLUM08G04690 I
OMERI01G07770 Oryza meridionalis OMERI01G07770 I
OMERI04G06880 Oryza meridionalis OMERI04G06880 I
OMERI04G09670 Oryza meridionalis OMERI04G09670 I
OMERI07G22420 Oryza meridionalis OMERI07G22420 I
ONIVA01G10020 Oryza nivara ONIVA01G10020 I
ONIVA02G20420 Oryza nivara ONIVA02G20420 I
ONIVA04G09120 Oryza nivara ONIVA04G09120 I
ONIVA07G25390 Oryza nivara ONIVA07G25390 I
ONIVA08G04340 Oryza nivara ONIVA08G04340 I
OPUNC01G07600 Oryza punctata OPUNC01G07600 I
OPUNC04G09190 Oryza punctata OPUNC04G09190 I
OPUNC07G24180 Oryza punctata OPUNC07G24180 I
OPUNC08G04370 Oryza punctata OPUNC08G04370 I
orange1.1g037093m.g Citrus sinensis orange1.1g037093m.g I
orange1.1g038709m.g Citrus sinensis orange1.1g038709m.g N
orange1.1g043400m.g Citrus sinensis orange1.1g043400m.g I
orange1.1g044016m.g Citrus sinensis orange1.1g044016m.g I
orange1.1g046280m.g Citrus sinensis orange1.1g046280m.g I
orange1.1g046538m.g Citrus sinensis orange1.1g046538m.g I
ORGLA01G0069400 Oryza glaberrima ORGLA01G0069400 I
ORGLA02G0159100 Oryza glaberrima ORGLA02G0159100 I
ORGLA07G0201100 Oryza glaberrima ORGLA07G0201100 I
ORGLA08G0039300 Oryza glaberrima ORGLA08G0039300 I
ORUFI01G08530 Oryza rufipogon ORUFI01G08530 I
ORUFI02G19410 Oryza rufipogon ORUFI02G19410 I
ORUFI04G12370 Oryza rufipogon ORUFI04G12370 I
ORUFI07G26720 Oryza rufipogon ORUFI07G26720 I
ORUFI08G04980 Oryza rufipogon ORUFI08G04980 I
OS01G0224100 Oryza sativa OS01G0224100 I
OS02G0520000 Oryza sativa OS02G0520000 I
OS04G0399800 Oryza sativa OS04G0399800 I
OS07G0669500 Oryza sativa OS07G0669500 I
OS08G0173700 Oryza sativa OS08G0173700 I
Pavir.Aa01903 Panicum virgatum Pavir.Aa01903 I
Pavir.Ab01422 Panicum virgatum Pavir.Ab01422 I
Pavir.Ba00192 Panicum virgatum Pavir.Ba00192 I
Pavir.Fb00452 Panicum virgatum Pavir.Fb00452 N
Pavir.Gb01913 Panicum virgatum Pavir.Gb01913 I
Pavir.J16868 Panicum virgatum Pavir.J16868 I
Pavir.J21660 Panicum virgatum Pavir.J21660 I
Pavir.J29008 Panicum virgatum Pavir.J29008 I
PGSC0003DMG400002185 Solanum tuberosum PGSC0003DMG400002185 I
PGSC0003DMG400002191 Solanum tuberosum PGSC0003DMG400002191 I
PGSC0003DMG400003431 Solanum tuberosum PGSC0003DMG400003431 I
PGSC0003DMG400004515 Solanum tuberosum PGSC0003DMG400004515 I
PGSC0003DMG400018613 Solanum tuberosum PGSC0003DMG400018613 I
PGSC0003DMG400021969 Solanum tuberosum PGSC0003DMG400021969 I
PGSC0003DMG400022667 Solanum tuberosum PGSC0003DMG400022667 I
Pm000232 Prunus mume Pm000232 I
Pm006759 Prunus mume Pm006759 I
Pm007113 Prunus mume Pm007113 I
Pm008145 Prunus mume Pm008145 I
POPTR_0001s12820 Populus trichocarpa POPTR_0001s12820 I
POPTR_0001s15710 Populus trichocarpa POPTR_0001s15710 I
POPTR_0003s07540 Populus trichocarpa POPTR_0003s07540 I
POPTR_0003s15940 Populus trichocarpa POPTR_0003s15940 I
POPTR_0008s19030 Populus trichocarpa POPTR_0008s19030 I
POPTR_0010s05670 Populus trichocarpa POPTR_0010s05670 I
POPTR_0019s11780 Populus trichocarpa POPTR_0019s11780 I
PRUPE_ppa018569mg Prunus persica PRUPE_ppa018569mg I
PRUPE_ppa022995mg Prunus persica PRUPE_ppa022995mg I
PRUPE_ppa023203mg Prunus persica PRUPE_ppa023203mg I
PRUPE_ppa024329mg Prunus persica PRUPE_ppa024329mg I
PRUPE_ppa025495mg Prunus persica PRUPE_ppa025495mg I
PUCHI Arabidopsis lyrata fgenesh2_kg.6__1873__AT5G18560.1 I
PUCHI Populus trichocarpa POPTR_0008s22750 I
Q84J59_MAIZE Zea mays Q84J59_MAIZE D
SapurV1A.0022s0550 Salix purpurea SapurV1A.0022s0550 I
SapurV1A.0069s0280 Salix purpurea SapurV1A.0069s0280 I
SapurV1A.0122s0040 Salix purpurea SapurV1A.0122s0040 I
SapurV1A.0210s0020 Salix purpurea SapurV1A.0210s0020 I
SapurV1A.0317s0220 Salix purpurea SapurV1A.0317s0220 I
SapurV1A.0444s0130 Salix purpurea SapurV1A.0444s0130 I
SapurV1A.0444s0140 Salix purpurea SapurV1A.0444s0140 I
SapurV1A.1095s0050 Salix purpurea SapurV1A.1095s0050 I
SapurV1A.1120s0010 Salix purpurea SapurV1A.1120s0010 I
SapurV1A.2120s0040 Salix purpurea SapurV1A.2120s0040 I
Sb06g014800 Sorghum bicolor Sb06g014800 I
Sb07g004655 Sorghum bicolor Sb07g004655 I
SELMODRAFT_49949 Selaginella moellendorffii SELMODRAFT_49949 I
SELMODRAFT_49951 Selaginella moellendorffii SELMODRAFT_49951 I
Si012587m.g Setaria italica Si012587m.g I
Si015237m.g Setaria italica Si015237m.g I
Si019328m.g Setaria italica Si019328m.g I
Si019641m.g Setaria italica Si019641m.g I
Si032771m.g Setaria italica Si032771m.g I
Solyc01g067540.1 Solanum lycopersicum Solyc01g067540.1 I
Solyc04g072300.1 Solanum lycopersicum Solyc04g072300.1 I
Solyc05g013540.1 Solanum lycopersicum Solyc05g013540.1 I
Solyc11g006050.1 Solanum lycopersicum Solyc11g006050.1 I
Solyc11g045680.1 Solanum lycopersicum Solyc11g045680.1 I
Solyc11g045690.1 Solanum lycopersicum Solyc11g045690.1 I
TCM_008270 Theobroma cacao TCM_008270 I
TCM_010540 Theobroma cacao TCM_010540 I
TCM_017382 Theobroma cacao TCM_017382 I
TCM_021164 Theobroma cacao TCM_021164 I
TCM_036616 Theobroma cacao TCM_036616 I
Thhalv10008321m.g Eutrema salsugineum Thhalv10008321m.g I
Thhalv10008615m.g Eutrema salsugineum Thhalv10008615m.g I
Thhalv10009328m.g Eutrema salsugineum Thhalv10009328m.g I
Thhalv10009647m.g Eutrema salsugineum Thhalv10009647m.g I
Thhalv10014022m.g Eutrema salsugineum Thhalv10014022m.g I
Thhalv10015796m.g Eutrema salsugineum Thhalv10015796m.g I
Traes_2AL_F24D031AA Triticum aestivum Traes_2AL_F24D031AA I
Traes_2BL_5DC21F3CD Triticum aestivum Traes_2BL_5DC21F3CD I
Traes_2BL_970693C1F Triticum aestivum Traes_2BL_970693C1F I
Traes_2BL_E7871AFBA Triticum aestivum Traes_2BL_E7871AFBA I
TRIUR3_35273 Triticum urartu TRIUR3_35273 I