CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB08G17050
(
Oryza brachyantha
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
OB08G17050
T323888_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB08G17050.1
Sigma 70
342
412
MARSNFRLVIHVARKYEGYGLDIQDLVQDGCCGLMKTFEKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRL
Links
Other
Sigma 70
family TFs
Other
Oryza brachyantha
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CaO19.13271
Candida albicans
CaO19.13271
N
CaO19.5849
Candida albicans
CaO19.5849
N
CD36_30880
Candida dubliniensis
CD36_30880
N
CPAG_04097
Candida parapsilosis
CPAG_04097
N
CTRG_00574
Candida tropicalis
CTRG_00574
N
DEHA2G23188g
Debaryomyces hansenii
DEHA2G23188g
N
estExt_fgeneshMC_pg.C_30927
Mucor circinelloides
estExt_fgeneshMC_pg.C_30927
N
estExt_gwp_genewisePlus_human.C_chr_2.11897
Pichia stipitis
estExt_gwp_genewisePlus_human.C_chr_2.11897
N
G210_0876
Candida maltosa
G210_0876
N
GNLVRS01_PISO0I16046g
Millerozyma farinosa
GNLVRS01_PISO0I16046g
N
GNLVRS01_PISO0J17851g
Millerozyma farinosa
GNLVRS01_PISO0J17851g
N
LELG_03276
Lodderomyces elongisporus
LELG_03276
N
PGUG_04098
Meyerozyma guilliermondii
PGUG_04098
N
PGUG_04098
Candida guilliermondii
PGUG_04098
N
PICST_87861
Scheffersomyces stipitis
PICST_87861
N
RO3G_02623
Rhizopus oryzae
RO3G_02623
N
SPAPADRAFT_59559
Spathaspora passalidarum
SPAPADRAFT_59559
N