CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400021553
(
Solanum tuberosum
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
PGSC0003DMG400021553
T323940_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400055506
Sigma 70
326
396
LINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWIRQSVRKAIFQHSRT
PGSC0003DMT400055507
Sigma 70
75
145
LINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWIRQSVRKAIFQHSRT
PGSC0003DMT400055509
Sigma 70
326
396
LINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWIRQSVRKAIFQHSRT
PGSC0003DMT400055510
Sigma 70
179
249
LINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWIRQSVRKAIFQHSRT
Links
Other
Sigma 70
family TFs
Other
Solanum tuberosum
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHGG_02358
Chaetomium globosum
CHGG_02358
N