SIG4 (Populus trichocarpa)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 POPTR_0009s06210 T323955_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0009s06210.1 Sigma 70 189 259
POPTR_0009s06210.2 Sigma 70 189 259
POPTR_0009s06210.3 Sigma 70 189 259
POPTR_0009s06210.4 Sigma 70 189 259
POPTR_0009s06210.5 Sigma 70 189 259

Links

Other Sigma 70 family TFs
Other Populus trichocarpa TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BAUCODRAFT_144905 Baudoinia compniacensis BAUCODRAFT_144905 N 0.000
DOTSEDRAFT_67992 Dothistroma septosporum DOTSEDRAFT_67992 N 0.000
estExt_Genewise1.C_chr_40669 Mycosphaerella graminicola estExt_Genewise1.C_chr_40669 N 0.000
estExt_Genewise1Plus.C_13626 Mycosphaerella fijiensis estExt_Genewise1Plus.C_13626 N 0.000
M438DRAFT_343467 Aureobasidium pullulans M438DRAFT_343467 N 0.000
MYCFIDRAFT_55893 Pseudocercospora fijiensis MYCFIDRAFT_55893 N 0.000
Mycgr3G57911 Zymoseptoria tritici Mycgr3G57911 N 0.000
SEPMUDRAFT_146766 Sphaerulina musiva SEPMUDRAFT_146766 N 0.000