CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_280046
(
Physcomitrella patens
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
estExt_fgenesh1_pg.C_280046
T324110_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_280046
Sigma 70
354
424
MVNSNLRLVVSIVKNYQGRGMTLPDLIQEGSMGLIRGAEKFDPDKGFKFSTYAHWWIRQAVTRAIADQSRI
Links
Other
Sigma 70
family TFs
Other
Physcomitrella patens
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pc18g04020
Penicillium chrysogenum
Pc18g04020
N
PCH_Pc18g04020
Penicillium rubens
PCH_Pc18g04020
N
PDIP_72080
Penicillium digitatum
PDIP_72080
N
PEX1_020250
Penicillium expansum
PEX1_020250
N
PITC_026320
Penicillium italicum
PITC_026320
N