CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.23794s0392
(
Boechera stricta
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
Bostr.23794s0392
T324152_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.23794s0392.1.p
Sigma 70
310
380
LITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRT
Links
Other
Sigma 70
family TFs
Other
Boechera stricta
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R015658
Calypte anna
Aan_R015658
N
Afo_R011091
Aptenodytes forsteri
Afo_R011091
N
ENSGALG00000006902
Gallus gallus
ENSGALG00000006902
N
ENSSHAG00000004755
Sarcophilus harrisii
ENSSHAG00000004755
N
Gfo_R005355
Geospiza fortis
Gfo_R005355
N
ZNF335
Meleagris gallopavo
ENSMGAG00000008424
N
ZNF335
Taeniopygia guttata
ENSTGUG00000005969
N