CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.D01094
(
Eucalyptus grandis
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
Eucgr.D01094
T324178_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.D01094.1
Sigma 70
354
424
MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT
Links
Other
Sigma 70
family TFs
Other
Eucalyptus grandis
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CANTEDRAFT_114588
Candida tenuis
CANTEDRAFT_114588
N
CaO19.8536
Candida albicans
CaO19.8536
N
CLUG_04929
Candida lusitaniae
CLUG_04929
N
CLUG_04929
Clavispora lusitaniae
CLUG_04929
N
CORT_0E05910
Candida orthopsilosis
CORT_0E05910
N
CPAG_03309
Candida parapsilosis
CPAG_03309
N
CTRG_05284
Candida tropicalis
CTRG_05284
N
DEHA2E19250g
Debaryomyces hansenii
DEHA2E19250g
N
estExt_fgenesh1_pg.C_chr_7.10234
Pichia stipitis
estExt_fgenesh1_pg.C_chr_7.10234
N
G210_3437
Candida maltosa
G210_3437
N
LELG_03737
Lodderomyces elongisporus
LELG_03737
N
PICST_68338
Scheffersomyces stipitis
PICST_68338
N