CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene09615-v1.0-hybrid
(
Fragaria vesca
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
gene09615-v1.0-hybrid
T324187_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna09615.1-v1.0-hybrid
Sigma 70
291
361
LIYSNLRMVVHIAKQYQGRGLGLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWVRQTIRKAIFQHSRT
Links
Other
Sigma 70
family TFs
Other
Fragaria vesca
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALUE_0002118801
Ascaris lumbricoides
ALUE_0002118801
N
NBR_0000208001
Nippostrongylus brasiliensis
NBR_0000208001
N
OESDEN_18153
Oesophagostomum dentatum
OESDEN_18153
N
TELCIR_25863
Teladorsagia circumcincta
TELCIR_25863
N