CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10002486m.g
(
Eutrema salsugineum
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
Thhalv10002486m.g
T324252_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10002486m
Sigma 70
280
350
LAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRT
Links
Other
Sigma 70
family TFs
Other
Eutrema salsugineum
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_10233
Beauveria bassiana
BBA_10233
I
EFA84076.1
Polysphondylium pallidum
EFA84076.1
I
estExt_fgeneshDP_pg.C_810039
Dictyostelium purpureum
estExt_fgeneshDP_pg.C_810039
I
estExt_fgeneshMC_pg.C_50482
Mucor circinelloides
estExt_fgeneshMC_pg.C_50482
I
fgeneshPB_pg.14__263
Phycomyces blakesleeanus
fgeneshPB_pg.14__263
I
M407DRAFT_63874
Tulasnella calospora
M407DRAFT_63874
I
RO3G_03309
Rhizopus oryzae
RO3G_03309
I
TBLA_0B08790
Tetrapisispora blattae
TBLA_0B08790
I
UM05773
Ustilago maydis
UM05773
I