ENSGMOG00000019827 (Gadus morhua)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 ENSGMOG00000019827 T324673_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFIA
M03480_2.00 		Homo sapiens
YTGGCANNNTGCCAA
TTGGCANNNTGCCAR		 SELEX
Jolma et al.(2013)
NFIA_1 		0.956 0.956
NFIA
M03481_2.00 		Homo sapiens
NNTGCCAANN
NNTTGGCANN		 SELEX
Jolma et al.(2013)
NFIA_2 		0.956 0.956
NFIA
M09379_2.00 		Homo sapiens
YTGGCWNYNDGCCAD
HTGGCHNRNWGCCAR		 Misc
Kulakovskiy et al.(2013)
NFIA_HUMAN.H11MO.0.C 		0.956 0.956
Nfia
M09383_2.00 		Mus musculus
YTGGCWNYNDGCCAD
HTGGCHNRNWGCCAR		 Misc
Kulakovskiy et al.(2013)
NFIA_MOUSE.H11MO.0.C 		0.956 0.956
NFIA
M11282_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1A_Q6_01 		0.956 0.956
Nfia
M11291_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFIA_02 		0.956 0.956
NFIB
M03479_2.00 		Homo sapiens
YTGGCANNNTGCCAA
TTGGCANNNTGCCAR		 SELEX
Jolma et al.(2013)
NFIB_1 		0.945 0.945
NFIB
M05747_2.00 		Homo sapiens
NYTGGCNNNNYGCCARN
NYTGGCRNNNNGCCARN		 SELEX
Yin et al.(2017)
NFIB_FL_HT-SELEX 		0.945 0.945
Nfib
M09381_2.00 		Mus musculus
BVWGCCARV
BYTGGCWBV		 Misc
Kulakovskiy et al.(2013)
NFIB_MOUSE.H11MO.0.C 		0.945 0.945
NFIB
M11280_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1B_Q6_01 		0.945 0.945
NFIB
M11281_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1B_Q6 		0.945 0.945
NFIB
M05748_2.00 		Homo sapiens
NTTGGCDNNNTGCCARN
NYTGGCANNNHGCCAAN		 SELEX
Yin et al.(2017)
NFIB_FL_Methyl-HT-SELEX 		0.945 0.945
NFIX
M03475_2.00 		Homo sapiens
YTGGCNNNNTGCCAA
TTGGCANNNNGCCAR		 SELEX
Jolma et al.(2013)
NFIX_1 		0.912 0.912
NFIX
M03476_2.00 		Homo sapiens
NYTGGCDNN
NNHGCCARN		 SELEX
Jolma et al.(2013)
NFIX_2 		0.912 0.912
NFIX
M03477_2.00 		Homo sapiens
NYTGGCWNN
NNWGCCARN		 SELEX
Jolma et al.(2013)
NFIX_3 		0.912 0.912
NFIX
M03478_2.00 		Homo sapiens
TTGGCANNNTGCCAR
YTGGCANNNTGCCAA		 SELEX
Jolma et al.(2013)
NFIX_4 		0.912 0.912
NFIX
M05741_2.00 		Homo sapiens
NHTGGCDNNNTGCCADN
NHTGGCANNNHGCCADN		 SELEX
Yin et al.(2017)
NFIX_FL_HT-SELEX 		0.912 0.912
NFIX
M05742_2.00 		Homo sapiens
NYTGGCDNNNTGCCARN
NYTGGCANNNHGCCARN		 SELEX
Yin et al.(2017)
NFIX_FL_Methyl-HT-SELEX 		0.912 0.912
Nfic
M09385_2.00 		Mus musculus
NBYTGGCWN
NWGCCARVN		 Misc
Kulakovskiy et al.(2013)
NFIC_MOUSE.H11MO.0.A 		0.846 0.846
NFIC
M05745_2.00 		Homo sapiens
NTTGGCNNNNTGCCARN
NYTGGCANNNNGCCAAN		 SELEX
Yin et al.(2017)
NFIC_FL_HT-SELEX 		0.835 0.835
NFIC
M08164_2.00 		Homo sapiens
NNCTTGGCANN
NNTGCCAAGNN		 ChIP-seq
Mathelier et al.(2014)
MA0161.2 		0.835 0.835
NFIC
M09378_2.00 		Homo sapiens
BYTGGMHBYNDKCCMRV
BYKGGMHNRVDKCCARV		 Misc
Kulakovskiy et al.(2013)
NFIC_HUMAN.H11MO.0.A 		0.835 0.835
NFIC
M09635_2.00 		Homo sapiens
BYTGSCAV
BTGSCARV		 Misc
Heinz et al.(2010)
LNCaP-NF1_Unpublished 		0.835 0.835
NFIC
M09636_2.00 		Homo sapiens
BYTGGCHNNNDGCCAR
YTGGCHNNNDGCCARV		 Misc
Heinz et al.(2010)
LNCAP-NF1_Unpublished 		0.835 0.835
NFIC
M11278_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CTF1_01 		0.835 0.835
NFIC
M11279_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1C_Q6 		0.835 0.835
NFIC
M05746_2.00 		Homo sapiens
NYTGGCNNNNYGCCARN
NYTGGCRNNNNGCCARN		 SELEX
Yin et al.(2017)
NFIC_FL_Methyl-HT-SELEX 		0.835 0.835
NfI
M03968_2.00 		Drosophila melanogaster
YTGGCDNNNHGCCAR
YTGGCDNNNHGCCAR		 SELEX
Nitta et al.(2015)
NfI_1 		0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000021314 SMAD 65 169

Links

Other SMAD family TFs
Other Gadus morhua TFs

344 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_057460 Aspergillus clavatus CADACLAG00005513 I
AFUA_8G04130 Aspergillus fumigatus CADAFUAG00003064 I
ANIA_01425 Aspergillus nidulans CADANIAG00008037 D
ARB_05109 Arthroderma benhamiae ARB_05109 I
BAUCODRAFT_29699 Baudoinia compniacensis BAUCODRAFT_29699 N
BDDG_01581 Blastomyces dermatitidis BDDG_01581 I
CADAFLAG00013310 Aspergillus flavus CADAFLAG00013310 I
CADANGAG00013361 Aspergillus niger CADANGAG00013361 I
CADAORAG00009957 Aspergillus oryzae CADAORAG00009957 I
CIMG_04417 Coccidioides immitis CIMG_04417 I
CPC735_073310 Coccidioides posadasii CPC735_073310 I
DOTSEDRAFT_67989 Dothistroma septosporum DOTSEDRAFT_67989 N
estExt_Genewise1.C_12121 Mycosphaerella fijiensis estExt_Genewise1.C_12121 N
EURHEDRAFT_514838 Aspergillus ruber EURHEDRAFT_514838 I
gw1.1.2094.1 Mycosphaerella graminicola gw1.1.2094.1 N
H101_02474 Trichophyton interdigitale H101_02474 I
H102_05466 Trichophyton rubrum H102_05466 I
H105_05509 Trichophyton soudanense H105_05509 I
HCBG_08757 Histoplasma capsulatum HCBG_08757 I
MCYG_04594 Microsporum canis MCYG_04594 I
MGYG_08173 Microsporum gypseum MGYG_08173 I
MYCFIDRAFT_95483 Pseudocercospora fijiensis MYCFIDRAFT_95483 N
Mycgr3G20893 Zymoseptoria tritici Mycgr3G20893 N
NFIA_096840 Neosartorya fischeri CADNFIAG00009134 I
PAAG_01359 Paracoccidioides sp lutzii PAAG_01359 I
PABG_02017 Paracoccidioides brasiliensis PABG_02017 I
Pc21g11250 Penicillium chrysogenum Pc21g11250 I
PCH_Pc21g11250 Penicillium rubens PCH_Pc21g11250 I
PDE_00959 Penicillium oxalicum PDE_00959 I
PDIP_56920 Penicillium digitatum PDIP_56920 I
PITC_050730 Penicillium italicum PITC_050730 I
PMAA_086890 Penicillium marneffei PMAA_086890 I
PMAA_086890 Talaromyces marneffei PMAA_086890 I
PVAR5_4646 Byssochlamys spectabilis PVAR5_4646 I
SEPMUDRAFT_145995 Sphaerulina musiva SEPMUDRAFT_145995 N
SNOG_07131 Stagonospora nodorum SNOG_07131 N
TEQG_02389 Trichophyton equinum TEQG_02389 I
TRV_07860 Trichophyton verrucosum TRV_07860 I
TSTA_122170 Talaromyces stipitatus TSTA_122170 I
U727_00433961191 Penicillium solitum U727_00433961191 I
UREG_01649 Uncinocarpus reesii UREG_01649 I
W97_00606 Coniosporium apollinis W97_00606 N