CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Smad5
(
Mus musculus
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03165 (MH1)
IPR003619
ENSMUSG00000021540
T324767_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Smad5
M11288_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD5_01
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Smad5
M11292_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD5_03
1.000
1.000
SMAD1
M11286_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD1_01
0.961
0.961
SMAD1
M11287_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD1_Q6
0.961
0.961
SMAD9
M11274_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_01
0.931
0.931
Smad9
M11290_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_02
0.931
0.931
Smad9
M11289_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_03
0.931
0.931
Mad
M06446_2.00
Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC
B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648
0.892
0.892
Mad
M08427_2.00
Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS
ChIP-chip
Mathelier et al.(2014)
MA0535.1
0.892
0.892
Mad
M09692_2.00
Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM
Misc
Kulakovskiy et al.(2009)
Mad
0.892
0.892
Mad
M11293_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$MAD_Q6
0.892
0.892
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000065798
SMAD
31
132
AEKAVDALVKKLKKKKGAMEELEKALSSPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKEVCINPYHYKRVE
ENSMUSP00000105500
SMAD
31
132
AEKAVDALVKKLKKKKGAMEELEKALSSPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKEVCINPYHYKRVE
ENSMUSP00000105502
SMAD
31
132
AEKAVDALVKKLKKKKGAMEELEKALSSPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKEVCINPYHYKRVE
Links
Other
SMAD
family TFs
Other
Mus musculus
TFs
409 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL009171
Aedes aegypti
AAEL009171
N
AALB007121
Anopheles albimanus
AALB007121
N
AARA010071
Anopheles arabiensis
AARA010071
N
ACEP24968
Atta cephalotes
ACEP24968
N
ACHR006959
Anopheles christyi
ACHR006959
N
ACOM034973
Anopheles coluzzii
ACOM034973
N
ACUA023615
Anopheles culicifacies
ACUA023615
N
ACYPI008922
Acyrthosiphon pisum
ACYPI008922
N
ADAC008608
Anopheles darlingi
ADAC008608
N
ADIR002890
Anopheles dirus
ADIR002890
N
AEPI007432
Anopheles epiroticus
AEPI007432
N
AFAF018426
Anopheles farauti
AFAF018426
N
AFUN001494
Anopheles funestus
AFUN001494
N
AGAP003726
Anopheles gambiae
AGAP003726
N
AMEC020789
Anopheles melas
AMEC020789
N
AMEM010172
Anopheles merus
AMEM010172
N
AMIN002970
Anopheles minimus
AMIN002970
N
AQUA001486
Anopheles quadriannulatus
AQUA001486
N
ASTEI00671
Anopheles stephensi
ASTEI00671
N
BGIBMGA011510
Bombyx mori
BGIBMGA011510
N
CapteG195496
Capitella teleta
CapteG195496
N
CG13624
Drosophila melanogaster
FBgn0039209
N
CGI_10009013
Crassostrea gigas
CGI_10009013
N
CPIJ001396
Culex quinquefasciatus
CPIJ001396
N
CpipJ_CPIJ001396
Culex pipiens
CpipJ_CPIJ001396
N
DAPPUDRAFT_191081
Daphnia pulex
DAPPUDRAFT_191081
N
estExt_fgenesh2_pg.C_4800031
Branchiostoma floridae
estExt_fgenesh2_pg.C_4800031
N
fgenesh2_pg.scaffold_447000002
Branchiostoma floridae
fgenesh2_pg.scaffold_447000002
N
GB44555
Apis mellifera
GB44555
N
GD18285
Drosophila simulans
FBgn0189818
N
GG12336
Drosophila erecta
FBgn0104626
N
GJ23851
Drosophila virilis
FBgn0210946
N
GK14305
Drosophila willistoni
FBgn0216311
N
GM23477
Drosophila sechellia
FBgn0178344
N
HHAL003878-PA
Halyomorpha halys
HHAL003878-PA
N
HMEL006500
Heliconius melpomene
HMEL006500
N
Hsal_14938--XP_397095.2_APIME
Harpegnathos saltator
Hsal_14938--XP_397095.2_APIME
N
ISCW005126
Ixodes scapularis
ISCW005126
N
LDEC013255
Leptinotarsa decemlineata
LDEC013255
N
LLOJ008588
Lutzomyia longipalpis
LLOJ008588
N
LotgiG231402
Lottia gigantea
LotgiG231402
N
MCINX002154
Melitaea cinxia
MCINX002154
N
NEMVEDRAFT_v1g238168
Nematostella vectensis
NEMVEDRAFT_v1g238168
N
NV18305
Nasonia vitripennis
NV18305
N
Ocbimv22031434m.g
Octopus bimaculoides
Ocbimv22031434m.g
N
PHUM239100
Pediculus humanus
PHUM239100
N
PPAI007084
Phlebotomus papatasi
PPAI007084
N
RPRC005655
Rhodnius prolixus
RPRC005655
N
Sakowv30041832m.g
Saccoglossus kowalevskii
Sakowv30041832m.g
N
SMAR013202
Strigamia maritima
SMAR013202
N
TC000275
Tribolium castaneum
TC000275
N
tetur43g00160
Tetranychus urticae
tetur43g00160
N
YQE_10681
Dendroctonus ponderosae
YQE_10681
N