CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RSKR_0000082500
(
Rhabditophanes kr3021
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
RSKR_0000082500
T325878_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RSKR_0000082500.1
SMAD
29
132
SKKAIDSLVKKLQKHNKSALGLLERALKSEGREPTECVTIPRSLDGRLQISHRKALPHVIYCRVYRWPDLQSHHELKAIESCRYCYESGQKEICINPYHYQRVE
Links
Other
SMAD
family TFs
Other
Rhabditophanes kr3021
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA005293
Oryza indica
BGIOSGA005293
N
BRADI1G29920
Brachypodium distachyon
BRADI1G29920
N
BRADI3G60870
Brachypodium distachyon
BRADI3G60870
N
F775_04112
Aegilops tauschii
F775_04112
N
GRMZM2G073892
Zea mays
GRMZM2G073892
N
GRMZM2G402862
Zea mays
GRMZM2G402862
N
LPERR02G31960
Leersia perrieri
LPERR02G31960
N
LPERR06G23220
Leersia perrieri
LPERR06G23220
N
OB02G45490
Oryza brachyantha
OB02G45490
N
OBART02G38520
Oryza barthii
OBART02G38520
N
OLONG_006885
Oryza longistaminata
OLONG_006885
N
OMERI02G36320
Oryza meridionalis
OMERI02G36320
N
OMERI06G27760
Oryza meridionalis
OMERI06G27760
N
ONIVA02G41380
Oryza nivara
ONIVA02G41380
N
ONIVA06G30250
Oryza nivara
ONIVA06G30250
N
OPUNC02G35740
Oryza punctata
OPUNC02G35740
N
OPUNC06G25350
Oryza punctata
OPUNC06G25350
N
ORGLA02G0337900
Oryza glaberrima
ORGLA02G0337900
N
ORGLA06G0234600
Oryza glaberrima
ORGLA06G0234600
N
ORUFI02G40230
Oryza rufipogon
ORUFI02G40230
N
OS02G0833600
Oryza sativa
OS02G0833600
N
OS06G0719500
Oryza sativa
OS06G0719500
N
OS06G0720900
Oryza sativa
OS06G0720900
N
OS06G0724000
Oryza sativa
OS06G0724000
N
Pavir.J00689
Panicum virgatum
Pavir.J00689
N
Pavir.J01346
Panicum virgatum
Pavir.J01346
N
Pavir.J04759
Panicum virgatum
Pavir.J04759
N
Sb04g038600
Sorghum bicolor
Sb04g038600
N
Sb10g030400
Sorghum bicolor
Sb10g030400
N
Si007412m.g
Setaria italica
Si007412m.g
N
Si023448m.g
Setaria italica
Si023448m.g
N
Traes_7AL_3ED7A9663
Triticum aestivum
Traes_7AL_3ED7A9663
N
Traes_7DL_EECCC4DBF
Triticum aestivum
Traes_7DL_EECCC4DBF
N
TRIUR3_05244
Triticum urartu
TRIUR3_05244
N