CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN09141
(
Caenorhabditis brenneri
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CBN09141
T326898_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN09141
Sox
26
94
PERPLQPYMRYSRKMWPRVRAENPEAQLWDIGKIVGKMWLEITDAERSIFQHEYELEKADYEKQMKNFQ
Links
Other
Sox
family TFs
Other
Caenorhabditis brenneri
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AtbZIP6
Arabidopsis thaliana
AT2G22850
N
0.000
AtbZIP6
Arabidopsis lyrata
scaffold_400242.1
N
0.000
AtbZIP7
Arabidopsis lyrata
Al_scaffold_0007_270
N
0.000
AtbZIP7
Arabidopsis thaliana
AT4G37730
N
0.000
Bostr.19427s0055
Boechera stricta
Bostr.19427s0055
N
0.000
Bostr.7867s1634
Boechera stricta
Bostr.7867s1634
N
0.000
Cagra.4290s0007
Capsella grandiflora
Cagra.4290s0007
N
0.000
Carubv10007844m.g
Capsella rubella
Carubv10007844m.g
N
0.000
Carubv10024747m.g
Capsella rubella
Carubv10024747m.g
N
0.000
Cla014262
Citrullus lanatus
Cla014262
N
0.000
Cucsa.103380
Cucumis sativus
Cucsa.103380
N
0.000
Thhalv10000309m.g
Eutrema salsugineum
Thhalv10000309m.g
N
0.000
Thhalv10027117m.g
Eutrema salsugineum
Thhalv10027117m.g
N
0.000