ENSAMXG00000013048 (Astyanax mexicanus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSAMXG00000013048 T327559_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.595 0.725
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000013421 Sox 45 113

Links

Other Sox family TFs
Other Astyanax mexicanus TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AFUA_7G04170 Aspergillus fumigatus CADAFUAG00009404 N
ANIA_05691 Aspergillus nidulans CADANIAG00003374 I
CADAFLAG00000127 Aspergillus flavus CADAFLAG00000127 N
CADANGAG00010600 Aspergillus niger CADANGAG00010600 N
CSUB01_07726 Colletotrichum sublineola CSUB01_07726 N
EURHEDRAFT_460772 Aspergillus ruber EURHEDRAFT_460772 N
FGRRES_16927 Fusarium graminearum FGRRES_16927 N
FPSE_04457 Fusarium pseudograminearum FPSE_04457 N
GNLVRS01_PISO0I00844g Millerozyma farinosa GNLVRS01_PISO0I00844g N
GNLVRS01_PISO0I18070g Millerozyma farinosa GNLVRS01_PISO0I18070g N
GNLVRS01_PISO0J19831g Millerozyma farinosa GNLVRS01_PISO0J19831g N
NFIA_004700 Neosartorya fischeri CADNFIAG00000040 N
PGUG_00594 Candida guilliermondii PGUG_00594 N
PGUG_00594 Meyerozyma guilliermondii PGUG_00594 N
PGUG_05832 Candida guilliermondii PGUG_05832 I
PGUG_05832 Meyerozyma guilliermondii PGUG_05832 I
PV06_04157 Exophiala oligosperma PV06_04157 N
PV07_01614 Cladophialophora immunda PV07_01614 I
PV09_05539 Verruconis gallopava PV09_05539 N
PVAR5_1869 Byssochlamys spectabilis PVAR5_1869 N
PVAR5_2678 Byssochlamys spectabilis PVAR5_2678 N
UCREL1_7241 Eutypa lata UCREL1_7241 N
V565_050950 Rhizoctonia solani V565_050950 N
V565_080510 Rhizoctonia solani V565_080510 N
Z517_09549 Fonsecaea pedrosoi Z517_09549 N
Z518_00888 Rhinocladiella mackenziei Z518_00888 N
ZBAI_02843 Zygosaccharomyces bailii ZBAI_02843 I
ZBAI_09101 Zygosaccharomyces bailii ZBAI_09101 I