CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSONIG00000004158
(
Oreochromis niloticus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSONIG00000004158
T328694_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSONIP00000005237
Sox
1366
1434
RKINMSGYILFSSEMRAVIKARHPDFSFGELSRLVGTEWRNLEASKKAEYEERAAKIVEQQERERPPQK
Links
Other
Sox
family TFs
Other
Oreochromis niloticus
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0001613301
Anisakis simplex
ASIM_0001613301
N
0.417
ENSAMXG00000016832
Astyanax mexicanus
ENSAMXG00000016832
N
0.650
ENSORLG00000001101
Oryzias latipes
ENSORLG00000001101
N
0.533
ENSORLG00000018988
Oryzias latipes
ENSORLG00000018988
N
0.679
ENSORLG00000019807
Oryzias latipes
ENSORLG00000019807
N
0.533
ENSPFOG00000017300
Poecilia formosa
ENSPFOG00000017300
N
0.675
ENSXMAG00000016160
Xiphophorus maculatus
ENSXMAG00000016160
N
0.675
L596_g8243
Steinernema carpocapsae
L596_g8243
N
0.444
L889_g13125
Steinernema feltiae
L889_g13125
N
0.444
L892_g19322
Steinernema scapterisci
L892_g19322
N
0.444
L893_g19156
Steinernema glaseri
L893_g19156
N
0.444
L898_g14011
Steinernema monticolum
L898_g14011
N
0.444
pbrm1l
Danio rerio
ENSDARG00000077038
N
0.644
pbrm1l
Tetraodon nigroviridis
ENSTNIG00000014731
N
0.679
pbrm1l
Takifugu rubripes
ENSTRUG00000005335
N
0.679
Sakowv30031460m.g
Saccoglossus kowalevskii
Sakowv30031460m.g
N
0.436