CHD4 (Ochotona princeps)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSOPRG00000003477 T328741_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000003260 Sox 172 216

Links

Other Sox family TFs
Other Ochotona princeps TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30128.m009035 Ricinus communis 30128.m009035 I 0.000
30147.m014441 Ricinus communis 30147.m014441 N 0.000
ANAC083 Vitis vinifera VIT_01s0146g00280 I 0.000
ANAC083 Arabidopsis lyrata scaffold_601328.1 I 0.000
Aquca_021_00051 Aquilegia coerulea Aquca_021_00051 I 0.000
Bo2g011120 Brassica oleracea Bo2g011120 I 0.000
Bo3g009040 Brassica oleracea Bo3g009040 I 0.000
Bo4g181990 Brassica oleracea Bo4g181990 I 0.000
Bo9g168950 Brassica oleracea Bo9g168950 I 0.000
Bostr.2902s0053 Boechera stricta Bostr.2902s0053 I 0.000
Bra008849 Brassica rapa Bra008849 I 0.000
Bra021856 Brassica rapa Bra021856 I 0.000
Bra023395 Brassica rapa Bra023395 I 0.000
Cagra.0596s0010 Capsella grandiflora Cagra.0596s0010 I 0.000
Carubv10002548m.g Capsella rubella Carubv10002548m.g I 0.000
cassava1138.valid.m1 Manihot esculenta cassava1138.valid.m1 I 0.000
cassava12891.valid.m1 Manihot esculenta cassava12891.valid.m1 I 0.000
Ciclev10032547m.g Citrus clementina Ciclev10032547m.g I 0.000
Cla001517 Citrullus lanatus Cla001517 I 0.000
Cla011059 Citrullus lanatus Cla011059 I 0.000
Cucsa.095210 Cucumis sativus Cucsa.095210 N 0.000
Cucsa.349370 Cucumis sativus Cucsa.349370 I 0.000
Eucgr.B03537 Eucalyptus grandis Eucgr.B03537 I 0.000
Eucgr.H03387 Eucalyptus grandis Eucgr.H03387 I 0.000
evm.TU.supercontig_4.138 Carica papaya evm.TU.supercontig_4.138 N 0.000
GLYMA08G47520 Glycine max GLYMA08G47520 I 0.000
GLYMA18G53954 Glycine max GLYMA18G53954 I 0.000
Gorai.005G195300 Gossypium raimondii Gorai.005G195300 I 0.000
Gorai.012G125500 Gossypium raimondii Gorai.012G125500 I 0.000
GSMUA_Achr10G11910_001 Musa acuminata GSMUA_Achr10G11910_001 N 0.000
MDP0000126517 Malus domestica MDP0000126517 I 0.000
MDP0000130123 Malus domestica MDP0000130123 I 0.000
NAC083 Arabidopsis thaliana AT5G13180 D 0.000
orange1.1g030727m.g Citrus sinensis orange1.1g030727m.g I 0.000
PK12461.1 Cannabis sativa PK12461.1 I 0.000
Pm007070 Prunus mume Pm007070 I 0.000
POPTR_0001s13380 Populus trichocarpa POPTR_0001s13380 I 0.000
POPTR_0003s16490 Populus trichocarpa POPTR_0003s16490 I 0.000
PRUPE_ppa010222mg Prunus persica PRUPE_ppa010222mg I 0.000
SapurV1A.0173s0020 Salix purpurea SapurV1A.0173s0020 I 0.000
SapurV1A.0453s0210 Salix purpurea SapurV1A.0453s0210 I 0.000
TCM_008477 Theobroma cacao TCM_008477 I 0.000
Thhalv10014495m.g Eutrema salsugineum Thhalv10014495m.g I 0.000