CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hmgb2
(
Rattus norvegicus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSRNOG00000033321
T329055_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000039358
Sox
9
79
PRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDKARYDREMKNYV
ENSRNOP00000039358
Sox
95
163
PKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR
Links
Other
Sox
family TFs
Other
Rattus norvegicus
TFs
358 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
15460_YLR375W
Saccharomyces paradoxus
15460_YLR375W
I
15823_YLR375W
Saccharomyces mikatae
15823_YLR375W
I
16393_YLR375W
Saccharomyces bayanus
16393_YLR375W
I
3056_YDL048C
Saccharomyces mikatae
3056_YDL048C
I
3579_YDL048C
Saccharomyces paradoxus
3579_YDL048C
I
3742_YDL048C
Saccharomyces bayanus
3742_YDL048C
I
KAFR_0A06120
Kazachstania africana
KAFR_0A06120
I
KLTH0D13618g
Lachancea thermotolerans
KLTH0D13618g
I
KLTH0D13618g
Kluyveromyces thermotolerans
KLTH0D13618g
I
NCAS_0A02360
Naumovozyma castellii
NCAS_0A02360
I
NCAS_0J01300
Naumovozyma castellii
NCAS_0J01300
I
NDAI_0D04510
Naumovozyma dairenensis
NDAI_0D04510
I
Scas_Contig670.2
Saccharomyces castellii
Scas_Contig670.2
I
Scas_Contig683.30
Saccharomyces castellii
Scas_Contig683.30
I
SKUD_202710
Saccharomyces kudriavzevii
SKUD_202710
I
STP3
Saccharomyces cerevisiae
YLR375W
D
SU7_0544
Saccharomyces arboricola
SU7_0544
I
SU7_2363
Saccharomyces arboricola
SU7_2363
I
TBLA_0I02770
Tetrapisispora blattae
TBLA_0I02770
I
TDEL_0E01520
Torulaspora delbrueckii
TDEL_0E01520
I
ZBAI_02561
Zygosaccharomyces bailii
ZBAI_02561
I
ZBAI_06958
Zygosaccharomyces bailii
ZBAI_06958
I
ZYRO0B07436g
Zygosaccharomyces rouxii
ZYRO0B07436g
I