CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LOC691030
(
Rattus norvegicus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSRNOG00000057926
T329083_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000069436
Sox
9
79
PKVNVSPYVHFMMDFRNQMREQQPNIYYDFTEFSRKCSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYS
ENSRNOP00000069436
Sox
93
161
PRKPPSSFLLFSQDHFDEIKEQHPNWTVGQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAYH
Links
Other
Sox
family TFs
Other
Rattus norvegicus
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_02790
Aegilops tauschii
F775_02790
N
GRMZM2G030744
Zea mays
GRMZM2G030744
I
Lus10021416.g
Linum usitatissimum
Lus10021416.g
N
MTR_2g084280
Medicago truncatula
MTR_2g084280
N
Traes_3DL_4544FA87D
Triticum aestivum
Traes_3DL_4544FA87D
I
Traes_6AL_842E10085
Triticum aestivum
Traes_6AL_842E10085
N