CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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G210_1137
(
Candida maltosa
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
G210_1137
T329948_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NHP6A
M01566_2.00
Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN
PBM
Zhu et al.(2009)
Nhp6a
0.659
0.826
NHP6A
M08606_2.00
Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH
Misc
DeBoer et al.(2011)
YPR052C_879
0.659
0.826
NHP6B
M01565_2.00
Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN
PBM
Zhu et al.(2009)
Nhp6b
0.659
0.768
NHP6B
M08603_2.00
Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND
Misc
DeBoer et al.(2011)
YBR089C-A_792
0.659
0.768
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMG48310
Sox
20
88
PKRSLSAYMFFANENRDIVRAENPGITFGQVGKLLGEKWKALTPEDKTPYENKAEADKKRYEKEKAEYV
Links
Other
Sox
family TFs
Other
Candida maltosa
TFs
410 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava23109.valid.m1
Manihot esculenta
cassava23109.valid.m1
N
0.000
Ciclev10018794m.g
Citrus clementina
Ciclev10018794m.g
N
0.000
gene13309-v1.0-hybrid
Fragaria vesca
gene13309-v1.0-hybrid
N
0.000
GLYMA10G38320
Glycine max
GLYMA10G38320
N
0.000
Gorai.006G047000
Gossypium raimondii
Gorai.006G047000
N
0.000
MDP0000240375
Malus domestica
MDP0000240375
N
0.000
mgf023989m
Mimulus guttatus
mgf023989m
N
0.000
PK11838.1
Cannabis sativa
PK11838.1
N
0.000
POPTR_0012s13550
Populus trichocarpa
POPTR_0012s13550
N
0.000
POPTR_0015s13560
Populus trichocarpa
POPTR_0015s13560
N
0.000
PRUPE_ppa026277mg
Prunus persica
PRUPE_ppa026277mg
N
0.000
TCM_015107
Theobroma cacao
TCM_015107
N
0.000
VIT_14s0068g00770
Vitis vinifera
VIT_14s0068g00770
N
0.000