GLYMA01G07470 (Glycine max)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GLYMA01G07470 T330255_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA01G07470.2 Sox 4 72
GLYMA01G07470.2 Sox 120 186

Links

Other Sox family TFs
Other Glycine max TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00043p00136400 Amborella trichopoda AMTR_s00043p00136400 N 0.000
Aquca_005_00404 Aquilegia coerulea Aquca_005_00404 N 0.000
BGIOSGA025902 Oryza indica BGIOSGA025902 N 0.000
BRADI1G25370 Brachypodium distachyon BRADI1G25370 N 0.000
cassava24578.valid.m1 Manihot esculenta cassava24578.valid.m1 N 0.000
Ca_06943 Cicer arietinum Ca_06943 N 0.000
Ciclev10007843m.g Citrus clementina Ciclev10007843m.g N 0.000
CIGR1 Oryza sativa OS07G0545800 N 0.000
Cucsa.053270 Cucumis sativus Cucsa.053270 N 0.000
Eucgr.F03414 Eucalyptus grandis Eucgr.F03414 N 0.000
evm.TU.supercontig_3097.1 Carica papaya evm.TU.supercontig_3097.1 N 0.000
F775_07373 Aegilops tauschii F775_07373 N 0.000
gene03285-v1.0-hybrid Fragaria vesca gene03285-v1.0-hybrid N 0.000
GLYMA06G41500 Glycine max GLYMA06G41500 N 0.000
GLYMA12G16750 Glycine max GLYMA12G16750 N 0.000
GLYMA12G34420 Glycine max GLYMA12G34420 N 0.000
GLYMA13G36120 Glycine max GLYMA13G36120 N 0.000
Gorai.002G080600 Gossypium raimondii Gorai.002G080600 N 0.000
Gorai.009G427800 Gossypium raimondii Gorai.009G427800 N 0.000
Gorai.013G164700 Gossypium raimondii Gorai.013G164700 N 0.000
GRMZM5G821439 Zea mays GRMZM5G821439 N 0.000
GSMUA_Achr6G24310_001 Musa acuminata GSMUA_Achr6G24310_001 N 0.000
GSMUA_Achr8G03620_001 Musa acuminata GSMUA_Achr8G03620_001 N 0.000
LPERR07G15240 Leersia perrieri LPERR07G15240 N 0.000
Lus10035840.g Linum usitatissimum Lus10035840.g N 0.000
Lus10036623.g Linum usitatissimum Lus10036623.g N 0.000
MDP0000205622 Malus domestica MDP0000205622 N 0.000
mgf007614m Mimulus guttatus mgf007614m N 0.000
MLOC_37712 Hordeum vulgare MLOC_37712 N 0.000
MTR_2g082090 Medicago truncatula MTR_2g082090 N 0.000
OB07G23640 Oryza brachyantha OB07G23640 N 0.000
OBART07G17780 Oryza barthii OBART07G17780 N 0.000
OGLUM07G17420 Oryza glumaepatula OGLUM07G17420 N 0.000
OLONG_024541 Oryza longistaminata OLONG_024541 N 0.000
ONIVA07G16090 Oryza nivara ONIVA07G16090 N 0.000
OPUNC07G16570 Oryza punctata OPUNC07G16570 N 0.000
ORGLA07G0142600 Oryza glaberrima ORGLA07G0142600 N 0.000
ORUFI07G18480 Oryza rufipogon ORUFI07G18480 N 0.000
Pavir.Bb02923 Panicum virgatum Pavir.Bb02923 N 0.000
Pavir.J35699 Panicum virgatum Pavir.J35699 N 0.000
PGSC0003DMG400019232 Solanum tuberosum PGSC0003DMG400019232 N 0.000
PGSC0003DMG400021802 Solanum tuberosum PGSC0003DMG400021802 N 0.000
PK07026.1 Cannabis sativa PK07026.1 N 0.000
Pm029452 Prunus mume Pm029452 N 0.000
POPTR_0001s44090 Populus trichocarpa POPTR_0001s44090 N 0.000
POPTR_0011s13460 Populus trichocarpa POPTR_0011s13460 N 0.000
PRUPE_ppa003323mg Prunus persica PRUPE_ppa003323mg N 0.000
SapurV1A.0327s0070 Salix purpurea SapurV1A.0327s0070 N 0.000
SapurV1A.3085s0020 Salix purpurea SapurV1A.3085s0020 N 0.000
Sb02g035680 Sorghum bicolor Sb02g035680 N 0.000
Si029156m.g Setaria italica Si029156m.g N 0.000
Solyc07g063940.1 Solanum lycopersicum Solyc07g063940.1 N 0.000
Solyc12g005340.1 Solanum lycopersicum Solyc12g005340.1 N 0.000
TCM_031132 Theobroma cacao TCM_031132 N 0.000
Traes_2AS_620B821281 Triticum aestivum Traes_2AS_620B821281 N 0.000
Traes_2BS_4600D4B54 Triticum aestivum Traes_2BS_4600D4B54 N 0.000
Traes_2DS_2D035BAFD Triticum aestivum Traes_2DS_2D035BAFD N 0.000
TRIUR3_35245 Triticum urartu TRIUR3_35245 N 0.000
VIT_19s0014g04940 Vitis vinifera VIT_19s0014g04940 N 0.000