GSMUA_Achr5G11630_001 (Musa acuminata)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GSMUA_Achr5G11630_001 T330368_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMG-1
M02720_2.00 		Pisum sativum
STYGTDHTY
RADHACRAS		 SELEX
Mathelier et al.(2014)
MA0044.1 		0.428 0.681
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P11630_001 Sox 45 114

Links

Other Sox family TFs
Other Musa acuminata TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AUEXF2481DRAFT_530826 Aureobasidium subglaciale AUEXF2481DRAFT_530826 N
BBA_00859 Beauveria bassiana BBA_00859 N
estExt_Genewise1Plus.C_10560 Mycosphaerella fijiensis estExt_Genewise1Plus.C_10560 N
M438DRAFT_276208 Aureobasidium pullulans M438DRAFT_276208 N
MYCFIDRAFT_54726 Pseudocercospora fijiensis MYCFIDRAFT_54726 N
Mycgr3G89934 Zymoseptoria tritici Mycgr3G89934 N
OIDMADRAFT_189260 Oidiodendron maius OIDMADRAFT_189260 N
SEPMUDRAFT_57525 Sphaerulina musiva SEPMUDRAFT_57525 N
TSTA_063990 Talaromyces stipitatus TSTA_063990 N
VDAG_09064 Verticillium dahliae VDAG_09064 N
VHEMI04633 Torrubiella hemipterigena VHEMI04633 N
VHEMI05472 Torrubiella hemipterigena VHEMI05472 N