CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GSPATT00029100001
(
Paramecium tetraurelia
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GSPATT00029100001
T330406_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAK58064
Sox
10
80
KPPTRNYISGYQIFYAEKLPELRKEGKFQIGDAGHKISEMWRELEDDERSKYEDQFNEMESKYKEDLILYY
CAK58064
Sox
100
168
PRKPASACLVYIAEHRKEYSNQNPDMNMAQLTKSLADKYGGLPNKDKKRYEDDFQKKLEQYHKDIEIWQ
Links
Other
Sox
family TFs
Other
Paramecium tetraurelia
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.sca_11_chr8_3_0000371
Nectria haematococca
fgenesh1_pg.sca_11_chr8_3_0000371
N
JL09_g1522
Pichia kudriavzevii
JL09_g1522
N