HPODL_03671 (Ogataea parapolymorpha)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 HPODL_03671 T330660_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP6A
M01566_2.00 		Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN		 PBM
Zhu et al.(2009)
Nhp6a 		0.599 0.754
NHP6A
M08606_2.00 		Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH		 Misc
DeBoer et al.(2011)
YPR052C_879 		0.599 0.754
NHP6B
M01565_2.00 		Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN		 PBM
Zhu et al.(2009)
Nhp6b 		0.599 0.696
NHP6B
M08603_2.00 		Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND		 Misc
DeBoer et al.(2011)
YBR089C-A_792 		0.599 0.696
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ESW99801 Sox 19 87

Links

Other Sox family TFs
Other Ogataea parapolymorpha TFs

368 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29780.m001368 Ricinus communis 29780.m001368 I
30169.m006598 Ricinus communis 30169.m006598 I
AMTR_s00037p00221530 Amborella trichopoda AMTR_s00037p00221530 I
AMTR_s00044p00042560 Amborella trichopoda AMTR_s00044p00042560 I
Aquca_002_01368 Aquilegia coerulea Aquca_002_01368 I
Aquca_066_00001 Aquilegia coerulea Aquca_066_00001 I
AT1G14600 Arabidopsis thaliana AT1G14600 D
AT2G02060 Arabidopsis thaliana AT2G02060 I
AT4G04605 Arabidopsis thaliana AT4G04605 I
BGIOSGA011527 Oryza indica BGIOSGA011527 I
BGIOSGA016936 Oryza indica BGIOSGA016936 I
BGIOSGA023442 Oryza indica BGIOSGA023442 N
BGIOSGA031479 Oryza indica BGIOSGA031479 I
BGIOSGA036796 Oryza indica BGIOSGA036796 I
BGIOSGA036807 Oryza indica BGIOSGA036807 I
Bo2g104640 Brassica oleracea Bo2g104640 I
Bo2g134900 Brassica oleracea Bo2g134900 I
Bo5g019810 Brassica oleracea Bo5g019810 I
Bo7g080160 Brassica oleracea Bo7g080160 I
Bo8g106700 Brassica oleracea Bo8g106700 I
Bo9g071530 Brassica oleracea Bo9g071530 I
Bostr.0556s0031 Boechera stricta Bostr.0556s0031 I
Bostr.24340s0004 Boechera stricta Bostr.24340s0004 I
Bostr.7199s0006 Boechera stricta Bostr.7199s0006 I
Bra018498 Brassica rapa Bra018498 I
Bra024836 Brassica rapa Bra024836 I
Bra026202 Brassica rapa Bra026202 I
Bra026618 Brassica rapa Bra026618 I
Bra026818 Brassica rapa Bra026818 I
BRADI1G32370 Brachypodium distachyon BRADI1G32370 N
BRADI1G71910 Brachypodium distachyon BRADI1G71910 I
BRADI3G51410 Brachypodium distachyon BRADI3G51410 I
BRADI5G18590 Brachypodium distachyon BRADI5G18590 N
Cagra.0549s0004 Capsella grandiflora Cagra.0549s0004 I
Cagra.3501s0036 Capsella grandiflora Cagra.3501s0036 I
Cagra.4137s0009 Capsella grandiflora Cagra.4137s0009 I
Carubv10003097m.g Capsella rubella Carubv10003097m.g I
Carubv10010057m.g Capsella rubella Carubv10010057m.g I
Carubv10017538m.g Capsella rubella Carubv10017538m.g I
cassava20298.m1 Manihot esculenta cassava20298.m1 I
cassava27240.m1 Manihot esculenta cassava27240.m1 I
Ca_00645 Cicer arietinum Ca_00645 I
Ca_05422 Cicer arietinum Ca_05422 I
Ca_08598 Cicer arietinum Ca_08598 I
Ca_12377 Cicer arietinum Ca_12377 I
Ca_14800 Cicer arietinum Ca_14800 I
chr5.LjT14K23.60.nc Lotus japonicus chr5.LjT14K23.60.nc I
Ciclev10005466m.g Citrus clementina Ciclev10005466m.g I
Ciclev10011992m.g Citrus clementina Ciclev10011992m.g I
Ciclev10017867m.g Citrus clementina Ciclev10017867m.g I
Ciclev10018145m.g Citrus clementina Ciclev10018145m.g I
Ciclev10029989m.g Citrus clementina Ciclev10029989m.g I
Ciclev10032941m.g Citrus clementina Ciclev10032941m.g I
Cla017202 Citrullus lanatus Cla017202 I
Cucsa.277160 Cucumis sativus Cucsa.277160 I
estExt_fgenesh1_pg.C_1660037 Physcomitrella patens estExt_fgenesh1_pg.C_1660037 I
estExt_fgenesh1_pg.C_550102 Physcomitrella patens estExt_fgenesh1_pg.C_550102 I
Eucgr.B02627 Eucalyptus grandis Eucgr.B02627 I
evm.TU.supercontig_2.82 Carica papaya evm.TU.supercontig_2.82 I
F775_02595 Aegilops tauschii F775_02595 N
F775_03870 Aegilops tauschii F775_03870 I
F775_04264 Aegilops tauschii F775_04264 I
F775_04777 Aegilops tauschii F775_04777 I
F775_13531 Aegilops tauschii F775_13531 I
F775_22605 Aegilops tauschii F775_22605 I
fgenesh2_kg.1__1592__AT1G14600.1 Arabidopsis lyrata fgenesh2_kg.1__1592__AT1G14600.1 I
fgenesh2_kg.5__121__AT2G02060.1 Arabidopsis lyrata fgenesh2_kg.5__121__AT2G02060.1 I
fgenesh2_pg.scaffold_137000062 Physcomitrella patens fgenesh2_pg.scaffold_137000062 I
fgenesh2_pg.scaffold_82000058 Physcomitrella patens fgenesh2_pg.scaffold_82000058 I
gene00600-v1.0-hybrid Fragaria vesca gene00600-v1.0-hybrid I
gene19641-v1.0-hybrid Fragaria vesca gene19641-v1.0-hybrid I
GLYMA05G29161 Glycine max GLYMA05G29161 I
GLYMA07G19585 Glycine max GLYMA07G19585 I
GLYMA08G12320 Glycine max GLYMA08G12320 I
GLYMA09G00685 Glycine max GLYMA09G00685 I
GLYMA13G30154 Glycine max GLYMA13G30154 I
GLYMA15G08970 Glycine max GLYMA15G08970 I
GLYMA15G11576 Glycine max GLYMA15G11576 I
GLYMA20G00861 Glycine max GLYMA20G00861 I
GLYMA20G24290 Glycine max GLYMA20G24290 I
Gorai.002G169300 Gossypium raimondii Gorai.002G169300 I
Gorai.004G233300 Gossypium raimondii Gorai.004G233300 I
Gorai.009G161800 Gossypium raimondii Gorai.009G161800 I
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I
Gorai.010G181100 Gossypium raimondii Gorai.010G181100 I
Gorai.011G039000 Gossypium raimondii Gorai.011G039000 I
GRMZM2G069525 Zea mays GRMZM2G069525 I
GRMZM2G090230 Zea mays GRMZM2G090230 I
GRMZM2G100709 Zea mays GRMZM2G100709 N
GRMZM2G106185 Zea mays GRMZM2G106185 I
GRMZM2G374986 Zea mays GRMZM2G374986 I
GRMZM2G454449 Zea mays GRMZM2G454449 N
GRMZM5G887276 Zea mays GRMZM5G887276 I
GSMUA_Achr11G01510_001 Musa acuminata GSMUA_Achr11G01510_001 I
GSMUA_Achr2G11010_001 Musa acuminata GSMUA_Achr2G11010_001 I
GSMUA_Achr4G25920_001 Musa acuminata GSMUA_Achr4G25920_001 I
GSMUA_Achr5G19200_001 Musa acuminata GSMUA_Achr5G19200_001 I
GSMUA_Achr7G03510_001 Musa acuminata GSMUA_Achr7G03510_001 I
GSMUA_Achr7G13880_001 Musa acuminata GSMUA_Achr7G13880_001 I
GSMUA_AchrUn_randomG06480_001 Musa acuminata GSMUA_AchrUn_randomG06480_001 I
LjSGA_106880.1 Lotus japonicus LjSGA_106880.1 I
LPERR02G22340 Leersia perrieri LPERR02G22340 I
LPERR03G02180 Leersia perrieri LPERR03G02180 I
LPERR04G17940 Leersia perrieri LPERR04G17940 I
LPERR06G20200 Leersia perrieri LPERR06G20200 N
LPERR10G13190 Leersia perrieri LPERR10G13190 I
Lus10001149.g Linum usitatissimum Lus10001149.g I
Lus10002207.g Linum usitatissimum Lus10002207.g I
Lus10007513.g Linum usitatissimum Lus10007513.g I
Lus10012239.g Linum usitatissimum Lus10012239.g I
Lus10017442.g Linum usitatissimum Lus10017442.g I
Lus10035093.g Linum usitatissimum Lus10035093.g I
MDP0000196504 Malus domestica MDP0000196504 I
MDP0000214282 Malus domestica MDP0000214282 I
MDP0000234120 Malus domestica MDP0000234120 I
MDP0000321302 Malus domestica MDP0000321302 I
mgf019744m Mimulus guttatus mgf019744m I
MLOC_53840 Hordeum vulgare MLOC_53840 N
MLOC_53958 Hordeum vulgare MLOC_53958 N
MLOC_56821 Hordeum vulgare MLOC_56821 I
MLOC_67081 Hordeum vulgare MLOC_67081 N
MLOC_67085 Hordeum vulgare MLOC_67085 N
MLOC_72013 Hordeum vulgare MLOC_72013 I
MTR_0223s0040 Medicago truncatula MTR_0223s0040 I
MTR_1g112370 Medicago truncatula MTR_1g112370 I
MTR_2g016220 Medicago truncatula MTR_2g016220 I
MTR_2g023580 Medicago truncatula MTR_2g023580 I
MTR_2g084230 Medicago truncatula MTR_2g084230 I
MTR_8g086410 Medicago truncatula MTR_8g086410 I
OB02G34860 Oryza brachyantha OB02G34860 I
OB03G12320 Oryza brachyantha OB03G12320 I
OB04G28940 Oryza brachyantha OB04G28940 I
OB06G32040 Oryza brachyantha OB06G32040 N
OB10G24340 Oryza brachyantha OB10G24340 I
OBART02G27470 Oryza barthii OBART02G27470 I
OBART03G02370 Oryza barthii OBART03G02370 I
OBART04G21930 Oryza barthii OBART04G21930 I
OBART06G24290 Oryza barthii OBART06G24290 N
OBART10G17270 Oryza barthii OBART10G17270 I
OBART11G00370 Oryza barthii OBART11G00370 I
OBART12G00180 Oryza barthii OBART12G00180 I
OGLUM02G28020 Oryza glumaepatula OGLUM02G28020 I
OGLUM03G02310 Oryza glumaepatula OGLUM03G02310 I
OGLUM04G21960 Oryza glumaepatula OGLUM04G21960 I
OGLUM06G25550 Oryza glumaepatula OGLUM06G25550 N
OGLUM11G00320 Oryza glumaepatula OGLUM11G00320 I
OGLUM12G00290 Oryza glumaepatula OGLUM12G00290 I
OLONG_000346 Oryza longistaminata OLONG_000346 I
OLONG_004539 Oryza longistaminata OLONG_004539 I
OLONG_011732 Oryza longistaminata OLONG_011732 I
OLONG_016687 Oryza longistaminata OLONG_016687 I
OLONG_026929 Oryza longistaminata OLONG_026929 N
OMERI02G06020 Oryza meridionalis OMERI02G06020 I
OMERI02G26760 Oryza meridionalis OMERI02G26760 I
OMERI03G02220 Oryza meridionalis OMERI03G02220 I
OMERI04G18450 Oryza meridionalis OMERI04G18450 I
OMERI06G24530 Oryza meridionalis OMERI06G24530 N
OMERI10G13750 Oryza meridionalis OMERI10G13750 I
OMERI11G00630 Oryza meridionalis OMERI11G00630 I
OMERI11G00820 Oryza meridionalis OMERI11G00820 I
ONIVA02G30300 Oryza nivara ONIVA02G30300 I
ONIVA03G01980 Oryza nivara ONIVA03G01980 I
ONIVA04G20480 Oryza nivara ONIVA04G20480 I
ONIVA06G30620 Oryza nivara ONIVA06G30620 N
ONIVA10G19340 Oryza nivara ONIVA10G19340 I
ONIVA11G00030 Oryza nivara ONIVA11G00030 I
ONIVA12G00410 Oryza nivara ONIVA12G00410 I
OPUNC02G25130 Oryza punctata OPUNC02G25130 I
OPUNC03G02160 Oryza punctata OPUNC03G02160 I
OPUNC04G19690 Oryza punctata OPUNC04G19690 I
OPUNC06G22010 Oryza punctata OPUNC06G22010 N
OPUNC10G15550 Oryza punctata OPUNC10G15550 I
OPUNC11G00360 Oryza punctata OPUNC11G00360 I
OPUNC12G00380 Oryza punctata OPUNC12G00380 I
orange1.1g017464m.g Citrus sinensis orange1.1g017464m.g I
orange1.1g020303m.g Citrus sinensis orange1.1g020303m.g I
orange1.1g029903m.g Citrus sinensis orange1.1g029903m.g I
orange1.1g035517m.g Citrus sinensis orange1.1g035517m.g I
orange1.1g041956m.g Citrus sinensis orange1.1g041956m.g I
orange1.1g043383m.g Citrus sinensis orange1.1g043383m.g I
ORGLA02G0236600 Oryza glaberrima ORGLA02G0236600 I
ORGLA03G0021400 Oryza glaberrima ORGLA03G0021400 I
ORGLA04G0189700 Oryza glaberrima ORGLA04G0189700 I
ORGLA06G0204400 Oryza glaberrima ORGLA06G0204400 N
ORGLA10G0122800 Oryza glaberrima ORGLA10G0122800 I
ORGLA11G0005200 Oryza glaberrima ORGLA11G0005200 I
ORGLA12G0000900 Oryza glaberrima ORGLA12G0000900 I
ORUFI02G28930 Oryza rufipogon ORUFI02G28930 I
ORUFI03G02110 Oryza rufipogon ORUFI03G02110 I
ORUFI04G23540 Oryza rufipogon ORUFI04G23540 I
ORUFI06G26110 Oryza rufipogon ORUFI06G26110 N
ORUFI10G18320 Oryza rufipogon ORUFI10G18320 I
ORUFI11G00320 Oryza rufipogon ORUFI11G00320 I
ORUFI12G00420 Oryza rufipogon ORUFI12G00420 I
OS04G0566600 Oryza sativa OS04G0566600 I
OS06G0670300 Oryza sativa OS06G0670300 N
OS11G0106100 Oryza sativa OS11G0106100 I
OS12G0105600 Oryza sativa OS12G0105600 I
Pavir.Aa00827 Panicum virgatum Pavir.Aa00827 I
Pavir.Ab02674 Panicum virgatum Pavir.Ab02674 I
Pavir.Da00200 Panicum virgatum Pavir.Da00200 N
Pavir.Db00422 Panicum virgatum Pavir.Db00422 N
Pavir.Gb01051 Panicum virgatum Pavir.Gb01051 I
Pavir.Ia04483 Panicum virgatum Pavir.Ia04483 I
Pavir.Ib00180 Panicum virgatum Pavir.Ib00180 I
Pavir.J09702 Panicum virgatum Pavir.J09702 I
Pavir.J33581 Panicum virgatum Pavir.J33581 I
PDK_20s1474441g001 Phoenix dactylifera PDK_20s1474441g001 I
PDK_20s1498711g001 Phoenix dactylifera PDK_20s1498711g001 I
PGSC0003DMG400004389 Solanum tuberosum PGSC0003DMG400004389 I
PGSC0003DMG400010194 Solanum tuberosum PGSC0003DMG400010194 I
PGSC0003DMG400029440 Solanum tuberosum PGSC0003DMG400029440 I
PK23854.1 Cannabis sativa PK23854.1 I
Pm010236 Prunus mume Pm010236 I
POPTR_0004s01060 Populus trichocarpa POPTR_0004s01060 I
POPTR_0008s14140 Populus trichocarpa POPTR_0008s14140 I
POPTR_0010s10990 Populus trichocarpa POPTR_0010s10990 I
POPTR_0021s00430 Populus trichocarpa POPTR_0021s00430 I
PRUPE_ppa014847mg Prunus persica PRUPE_ppa014847mg I
PRUPE_ppa021540mg Prunus persica PRUPE_ppa021540mg I
SapurV1A.0015s0960 Salix purpurea SapurV1A.0015s0960 I
SapurV1A.0029s0520 Salix purpurea SapurV1A.0029s0520 I
SapurV1A.0203s0150 Salix purpurea SapurV1A.0203s0150 I
SapurV1A.0429s0100 Salix purpurea SapurV1A.0429s0100 I
SapurV1A.3361s0010 Salix purpurea SapurV1A.3361s0010 I
Sb01g048420 Sorghum bicolor Sb01g048420 I
Sb04g032130 Sorghum bicolor Sb04g032130 I
Sb05g000480 Sorghum bicolor Sb05g000480 I
Sb06g025600 Sorghum bicolor Sb06g025600 I
Sb10g026930 Sorghum bicolor Sb10g026930 N
SELMODRAFT_414222 Selaginella moellendorffii SELMODRAFT_414222 I
SELMODRAFT_422768 Selaginella moellendorffii SELMODRAFT_422768 I
SELMODRAFT_426960 Selaginella moellendorffii SELMODRAFT_426960 I
SELMODRAFT_438636 Selaginella moellendorffii SELMODRAFT_438636 I
Si007179m.g Setaria italica Si007179m.g N
Si011884m.g Setaria italica Si011884m.g I
Si019625m.g Setaria italica Si019625m.g I
Si036127m.g Setaria italica Si036127m.g I
Si039234m.g Setaria italica Si039234m.g I
Solyc02g076670.2 Solanum lycopersicum Solyc02g076670.2 I
Solyc02g080720.1 Solanum lycopersicum Solyc02g080720.1 I
Solyc02g080860.1 Solanum lycopersicum Solyc02g080860.1 I
Solyc03g006150.2 Solanum lycopersicum Solyc03g006150.2 I
Solyc04g008480.1 Solanum lycopersicum Solyc04g008480.1 I
TCM_001726 Theobroma cacao TCM_001726 I
TCM_001942 Theobroma cacao TCM_001942 I
TCM_011166 Theobroma cacao TCM_011166 I
TCM_029684 Theobroma cacao TCM_029684 I
TCM_030248 Theobroma cacao TCM_030248 I
Thhalv10004791m.g Eutrema salsugineum Thhalv10004791m.g I
Thhalv10008620m.g Eutrema salsugineum Thhalv10008620m.g I
Thhalv10017090m.g Eutrema salsugineum Thhalv10017090m.g I
Traes_1BL_E2629CBC1 Triticum aestivum Traes_1BL_E2629CBC1 I
Traes_5BL_0C6735099 Triticum aestivum Traes_5BL_0C6735099 I
Traes_7AL_9A1395EC7 Triticum aestivum Traes_7AL_9A1395EC7 I
Traes_7AL_BF6FD97DA Triticum aestivum Traes_7AL_BF6FD97DA N
Traes_7DL_FEA7D3672 Triticum aestivum Traes_7DL_FEA7D3672 N
TRIUR3_11585 Triticum urartu TRIUR3_11585 I
TRIUR3_18158 Triticum urartu TRIUR3_18158 I
TRIUR3_18893 Triticum urartu TRIUR3_18893 N
TRIUR3_34172 Triticum urartu TRIUR3_34172 I
VIT_00s1624g00010 Vitis vinifera VIT_00s1624g00010 I
VIT_01s0137g00050 Vitis vinifera VIT_01s0137g00050 I
VIT_10s0003g01380 Vitis vinifera VIT_10s0003g01380 I
VIT_13s0067g01500 Vitis vinifera VIT_13s0067g01500 I