KAFR_0G01620 (Kazachstania africana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 KAFR_0G01620 T330764_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP6A
M01566_2.00 		Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN		 PBM
Zhu et al.(2009)
Nhp6a 		0.676 0.841
NHP6A
M08606_2.00 		Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH		 Misc
DeBoer et al.(2011)
YPR052C_879 		0.676 0.841
NHP6B
M01565_2.00 		Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN		 PBM
Zhu et al.(2009)
Nhp6b 		0.669 0.884
NHP6B
M08603_2.00 		Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND		 Misc
DeBoer et al.(2011)
YBR089C-A_792 		0.669 0.884
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCF59196 Sox 21 89

Links

Other Sox family TFs
Other Kazachstania africana TFs

355 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA018023 Oryza indica BGIOSGA018023 N 0.000
BRADI2G24790 Brachypodium distachyon BRADI2G24790 N 0.000
F775_32837 Aegilops tauschii F775_32837 N 0.000
GRMZM2G104400 Zea mays GRMZM2G104400 N 0.000
LPERR05G13650 Leersia perrieri LPERR05G13650 N 0.000
OB05G25040 Oryza brachyantha OB05G25040 N 0.000
OGLUM05G18240 Oryza glumaepatula OGLUM05G18240 N 0.000
OMERI05G14890 Oryza meridionalis OMERI05G14890 N 0.000
ONIVA05G17930 Oryza nivara ONIVA05G17930 N 0.000
OPUNC05G15090 Oryza punctata OPUNC05G15090 N 0.000
ORGLA05G0148600 Oryza glaberrima ORGLA05G0148600 N 0.000
ORUFI05G18410 Oryza rufipogon ORUFI05G18410 N 0.000
OS05G0426200 Oryza sativa OS05G0426200 N 0.000
Pavir.J02083 Panicum virgatum Pavir.J02083 N 0.000
Pavir.J07259 Panicum virgatum Pavir.J07259 N 0.000
Pavir.J18990 Panicum virgatum Pavir.J18990 N 0.000
Sb09g020880 Sorghum bicolor Sb09g020880 N 0.000
Traes_1AL_C4FA8404A Triticum aestivum Traes_1AL_C4FA8404A N 0.000
Traes_1BL_9018AA7BA Triticum aestivum Traes_1BL_9018AA7BA N 0.000
Traes_1DL_F410CF9FD Triticum aestivum Traes_1DL_F410CF9FD N 0.000
TRIUR3_22935 Triticum urartu TRIUR3_22935 N 0.000