CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCAS_0B03190
(
Naumovozyma castellii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
NCAS_0B03190
T331437_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HMO1
M11344_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$_HMO1_01
0.609
0.855
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC68403
Sox
111
184
PKKPLTVFFAYSAYVRQELRDERQRNGLPPLSSTEITQEISKKWKELNDTEKEKWKQAYNIELEHYQVEKQKYL
Links
Other
Sox
family TFs
Other
Naumovozyma castellii
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_209430
Agaricus bisporus
AGABI2DRAFT_209430
N
BN946_scf184962.g68
Trametes cinnabarina
BN946_scf184962.g68
N
CC1G_11281
Coprinopsis cinerea
CC1G_11281
N
CERSUDRAFT_137226
Ceriporiopsis subvermispora
CERSUDRAFT_137226
N
CY34DRAFT_71692
Suillus luteus
CY34DRAFT_71692
N
DICSQDRAFT_183662
Dichomitus squalens
DICSQDRAFT_183662
N
GLOTRDRAFT_118184
Gloeophyllum trabeum
GLOTRDRAFT_118184
N
HYDPIDRAFT_111320
Hydnomerulius pinastri
HYDPIDRAFT_111320
N
JAAARDRAFT_207695
Jaapia argillacea
JAAARDRAFT_207695
N
LACBIDRAFT_305344
Laccaria bicolor
LACBIDRAFT_305344
N
M378DRAFT_12877
Amanita muscaria
M378DRAFT_12877
N
M413DRAFT_445274
Hebeloma cylindrosporum
M413DRAFT_445274
N
Moror_2913
Moniliophthora roreri
Moror_2913
N
MPER_03826
Moniliophthora perniciosa
MPER_03826
N
PILCRDRAFT_820042
Piloderma croceum
PILCRDRAFT_820042
N
PLEOSDRAFT_1098618
Pleurotus ostreatus
PLEOSDRAFT_1098618
N
SCHCODRAFT_106746
Schizophyllum commune
SCHCODRAFT_106746
N
SERLA73DRAFT_72210
Serpula lacrymans
SERLA73DRAFT_72210
N