CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TBLA_0I02240
(
Tetrapisispora blattae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
TBLA_0I02240
T332787_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NHP6A
M01566_2.00
Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN
PBM
Zhu et al.(2009)
Nhp6a
0.728
0.870
NHP6A
M08606_2.00
Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH
Misc
DeBoer et al.(2011)
YPR052C_879
0.728
0.870
NHP6B
M01565_2.00
Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN
PBM
Zhu et al.(2009)
Nhp6b
0.721
0.899
NHP6B
M08603_2.00
Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND
Misc
DeBoer et al.(2011)
YBR089C-A_792
0.721
0.899
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCH62882
Sox
21
89
PKRALSAYMFFANETRDIVRSENPDVTFGQVGKILGERWKALSAEEKVPYETKAEADKKRYESEKELYN
Links
Other
Sox
family TFs
Other
Tetrapisispora blattae
TFs
459 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AUEXF2481DRAFT_530826
Aureobasidium subglaciale
AUEXF2481DRAFT_530826
N
CGGC5_13480
Colletotrichum gloeosporioides
CGGC5_13480
N
CH063_02132
Colletotrichum higginsianum
CH063_02132
N
Cob_02860
Colletotrichum orbiculare
Cob_02860
N
FFUJ_06535
Fusarium fujikuroi
FFUJ_06535
N
FGRRES_08135
Fusarium graminearum
FGRRES_08135
N
FOXG_02820
Fusarium oxysporum
FOXG_02820
N
FPSE_05458
Fusarium pseudograminearum
FPSE_05458
N
FVEG_01650
Fusarium verticillioides
FVEG_01650
N
M438DRAFT_276208
Aureobasidium pullulans
M438DRAFT_276208
N
NechaG77217
Fusarium solani
NechaG77217
N
S40288_01867
Stachybotrys chartarum
S40288_01867
N
SBOR_4351
Sclerotinia borealis
SBOR_4351
N
SEPMUDRAFT_57525
Sphaerulina musiva
SEPMUDRAFT_57525
N
Z517_03305
Fonsecaea pedrosoi
Z517_03305
N
Z518_06775
Rhinocladiella mackenziei
Z518_06775
N