CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thaps10374
(
Thalassiosira pseudonana
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
Thaps10374
T332903_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thaps10374
Sox
81
136
RKKRQDHVNHGIITFHDLTKTISHNWNTADLETRMYCKDLAEMELTRYHRDLSAYR
Links
Other
Sox
family TFs
Other
Thalassiosira pseudonana
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R008261
Calypte anna
Aan_R008261
I
Afo_R009018
Aptenodytes forsteri
Afo_R009018
I
Alligator_sinensis_CCG014169.1
Alligator sinensis
Alligator_sinensis_CCG014169.1
N
Brh_R011905
Buceros rhinoceros
Brh_R011905
I
Cmyd_10005826
Chelonia mydas
Cmyd_10005826
I
ENSAPLG00000006398
Anas platyrhynchos
ENSAPLG00000006398
I
ENSFALG00000007252
Ficedula albicollis
ENSFALG00000007252
I
Gfo_R008747
Geospiza fortis
Gfo_R008747
I
Tal_R011807
Tyto alba
Tal_R011807
I
TBX6
Gallus gallus
ENSGALG00000006374
I
TBX6
Meleagris gallopavo
ENSMGAG00000007663
I
TBX6
Taeniopygia guttata
ENSTGUG00000010188
I
vegt.L
Xenopus laevis
XB-GENE-6252142
N