TPHA_0G03540 (Tetrapisispora phaffii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 TPHA_0G03540 T332967_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IXR1
M08429_2.00 		Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG		 ChIP-chip
Mathelier et al.(2014)
MA0323.1 		0.680 0.853
IXR1
M11345_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$IXR1_01 		0.680 0.853
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCE64194 Sox 252 320
CCE64194 Sox 325 391

Links

Other Sox family TFs
Other Tetrapisispora phaffii TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSGACG00000004248 Gasterosteus aculeatus ENSGACG00000004248 N
ENSGACG00000007639 Gasterosteus aculeatus ENSGACG00000007639 N
ENSGMOG00000000095 Gadus morhua ENSGMOG00000000095 N
ENSLOCG00000004031 Lepisosteus oculatus ENSLOCG00000004031 N
ENSONIG00000002752 Oreochromis niloticus ENSONIG00000002752 N
ENSONIG00000019760 Oreochromis niloticus ENSONIG00000019760 N
ENSORLG00000006471 Oryzias latipes ENSORLG00000006471 N
ENSPFOG00000006642 Poecilia formosa ENSPFOG00000006642 N
ENSPFOG00000008123 Poecilia formosa ENSPFOG00000008123 I
ENSTNIG00000018468 Tetraodon nigroviridis ENSTNIG00000018468 N
ENSTRUG00000013996 Takifugu rubripes ENSTRUG00000013996 N
ENSTRUG00000015234 Takifugu rubripes ENSTRUG00000015234 N
ENSXMAG00000010541 Xiphophorus maculatus ENSXMAG00000010541 N
ENSXMAG00000015008 Xiphophorus maculatus ENSXMAG00000015008 I
kmt2bb Danio rerio ENSDARG00000060697 N