CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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UV8b_5674
(
Ustilaginoidea virens
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
UV8b_5674
T333165_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDB13576
Sox
371
435
PKRARTPYALFIKSRFPQANRESSSGSVQDAFRSMSEEWRSMSDSEKQPFQSKAAKEAEDSQTLL
Links
Other
Sox
family TFs
Other
Ustilaginoidea virens
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA002288
Oryza indica
BGIOSGA002288
N
OGLUM01G05200
Oryza glumaepatula
OGLUM01G05200
N
OMERI01G04770
Oryza meridionalis
OMERI01G04770
N
ONIVA01G05400
Oryza nivara
ONIVA01G05400
N
OPUNC01G04590
Oryza punctata
OPUNC01G04590
N
ORGLA01G0043900
Oryza glaberrima
ORGLA01G0043900
N
ORUFI01G05050
Oryza rufipogon
ORUFI01G05050
N
OS01G0174000
Oryza sativa
OS01G0174000
N