hmg-1.2 (Caenorhabditis elegans)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 WBGene00001972 T333268_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
F47D12.4a.1 Sox 47 113
F47D12.4a.1 Sox 135 203
F47D12.4a.2 Sox 47 113
F47D12.4a.2 Sox 135 203
F47D12.4b Sox 46 112
F47D12.4b Sox 134 202
F47D12.4c.1 Sox 47 115
F47D12.4c.1 Sox 133 201
F47D12.4c.2 Sox 47 115
F47D12.4c.2 Sox 133 201

Links

Other Sox family TFs
Other Caenorhabditis elegans TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA002858 Oryza indica BGIOSGA002858 I 0.000
F775_22234 Aegilops tauschii F775_22234 N 0.000
GRMZM2G052377 Zea mays GRMZM2G052377 I 0.000
GRMZM2G119693 Zea mays GRMZM2G119693 I 0.000
GRMZM2G143274 Zea mays GRMZM2G143274 N 0.000
GSMUA_Achr4G06410_001 Musa acuminata GSMUA_Achr4G06410_001 N 0.000
LPERR01G04110 Leersia perrieri LPERR01G04110 N 0.000
MLOC_19052 Hordeum vulgare MLOC_19052 N 0.000
OB01G14210 Oryza brachyantha OB01G14210 I 0.000
OBART01G04450 Oryza barthii OBART01G04450 N 0.000
ORGLA01G0040700 Oryza glaberrima ORGLA01G0040700 I 0.000
ORUFI01G04650 Oryza rufipogon ORUFI01G04650 N 0.000
ORUFI01G04660 Oryza rufipogon ORUFI01G04660 I 0.000
Pavir.Ea00486 Panicum virgatum Pavir.Ea00486 I 0.000
Pavir.Eb00460 Panicum virgatum Pavir.Eb00460 I 0.000
Pavir.Eb00461 Panicum virgatum Pavir.Eb00461 N 0.000
Pavir.J24104 Panicum virgatum Pavir.J24104 N 0.000
Sb03g004600 Sorghum bicolor Sb03g004600 I 0.000
Sb05g001215 Sorghum bicolor Sb05g001215 N 0.000
Si002550m.g Setaria italica Si002550m.g I 0.000
Si002595m.g Setaria italica Si002595m.g N 0.000
TRAES3BF059600070CFD_g Triticum aestivum TRAES3BF059600070CFD_g N 0.000
TRIUR3_34833 Triticum urartu TRIUR3_34833 N 0.000