CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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hmg-20
(
Caenorhabditis elegans
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
WBGene00012209
T333278_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
W02D9.3
Sox
127
193
PKRNRSGYVHFIIHRRASYSKAVMSQREINISLAADWQKLTAEERIPFQQRADEEKVKYLELMEEYK
Links
Other
Sox
family TFs
Other
Caenorhabditis elegans
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.003G021300
Gossypium raimondii
Gorai.003G021300
I
MLOC_12473
Hordeum vulgare
MLOC_12473
N
MLOC_46530
Hordeum vulgare
MLOC_46530
N
Traes_2BL_D50CC6A1D
Triticum aestivum
Traes_2BL_D50CC6A1D
N
Traes_2BL_D50CC6A1D1
Triticum aestivum
Traes_2BL_D50CC6A1D1
N
Traes_2DL_3C62DC707
Triticum aestivum
Traes_2DL_3C62DC707
N
Traes_2DL_C24C77B7E
Triticum aestivum
Traes_2DL_C24C77B7E
N
Traes_6AL_702DED986
Triticum aestivum
Traes_6AL_702DED986
N