CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh1_pg.C_30103
(
Cochliobolus heterostrophus C5
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
estExt_fgenesh1_pg.C_30103
T333998_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_30103
Sox
986
1062
VNPFLLFTKDFWYICKQECDEAHRAKSGNADAKAPKQEIRNAVGLKWRTAEQHVKQPYLDQASNAREDATASAVEFK
Links
Other
Sox
family TFs
Other
Cochliobolus heterostrophus C5
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB02344.1
Alternaria brassicicola
AB02344.1
N
PTRG_11177
Pyrenophora triticirepentis
PTRG_11177
N
PTT_09569
Pyrenophora teres
PTT_09569
N
SNOG_12614
Stagonospora nodorum
SNOG_12614
N
SNOG_12614
Phaeosphaeria nodorum
SNOG_12614
N