fgenesh2_pg.9_#_75 (Fragilariopsis cylindrus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh2_pg.9_#_75 T334136_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.9_#_75 Sox 34 65
fgenesh2_pg.9_#_75 Sox 76 132

Links

Other Sox family TFs
Other Fragilariopsis cylindrus TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCAFG00000030304 Canis familiaris ENSCAFG00000030304 N
ENSCSAG00000008003 Chlorocebus sabaeus ENSCSAG00000008003 N
ENSMMUP00000009479 Macaca fascicularis ENSMMUP00000009479 N
ZSCAN26 Callithrix jacchus ENSCJAG00000018640 N
ZSCAN26 Dasypus novemcinctus ENSDNOG00000048739 N
ZSCAN26 Equus caballus ENSECAG00000006796 N
ZSCAN26 Microcebus murinus ENSMICG00000010471 N
ZSCAN26 Macaca mulatta ENSMMUG00000007227 N
ZSCAN26 Oryctolagus cuniculus ENSOCUG00000016860 N
ZSCAN26 Procavia capensis ENSPCAG00000007308 N
ZSCAN26 Sus scrofa ENSSSCG00000001206 N
ZSCAN26 Tursiops truncatus ENSTTRG00000013221 N