CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ocbimv22028394m.g
(
Octopus bimaculoides
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Ocbimv22028394m.g
T334323_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22028394m.p
Sox
3
57
KIKKVASFTVFCNDYKNRLTTAYPFLTLDQIQQKLREKWNDLSLSEKKYYSKAVL
Links
Other
Sox
family TFs
Other
Octopus bimaculoides
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DAPPUDRAFT_316385
Daphnia pulex
DAPPUDRAFT_316385
N
0.427
LotgiG228477
Lottia gigantea
LotgiG228477
N
0.416