Pavir.Ca01033 (Panicum virgatum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Pavir.Ca01033 T334664_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca01033.1.p Sox 238 306
Pavir.Ca01033.2.p Sox 237 305

Links

Other Sox family TFs
Other Panicum virgatum TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AATE012494 Anopheles atroparvus AATE012494 N
ASIS023085 Anopheles sinensis ASIS023085 N
BGLB002935 Biomphalaria glabrata BGLB002935 N
CPIJ005175 Culex quinquefasciatus CPIJ005175 N
ENSLACG00000008022 Latimeria chalumnae ENSLACG00000008022 N
ENSMEUG00000002260 Macropus eugenii ENSMEUG00000002260 N
ENSTNIG00000002389 Tetraodon nigroviridis ENSTNIG00000002389 N
ENSXMAG00000013916 Xiphophorus maculatus ENSXMAG00000013916 N
GD16964 Drosophila simulans FBgn0188542 N
Myotis_brandtii_Sp6_10030434 Myotis brandtii Myotis_brandtii_Sp6_10030434 N
SP3 Vicugna pacos ENSVPAG00000009658 N
SP4 Choloepus hoffmanni ENSCHOG00000007448 N
SP4 Dasypus novemcinctus ENSDNOG00000014491 N
SP4 Procavia capensis ENSPCAG00000016506 N