PK14705.1 (Cannabis sativa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 PK14705.1 T334931_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMG-1
M02720_2.00 		Pisum sativum
STYGTDHTY
RADHACRAS		 SELEX
Mathelier et al.(2014)
MA0044.1 		0.497 0.717
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK14705.1 Sox 41 101

Links

Other Sox family TFs
Other Cannabis sativa TFs

264 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.000
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.000
L889_g16048 Steinernema feltiae L889_g16048 N 0.000
L892_g8146 Steinernema scapterisci L892_g8146 N 0.000
PPA29361 Pristionchus pacificus PPA29361 I 0.000
scaffold119-EXSNAP2012.21 Pristionchus exspectatus scaffold119-EXSNAP2012.21 N 0.000
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.000
scaffold1278-EXSNAP2012.5 Pristionchus exspectatus scaffold1278-EXSNAP2012.5 N 0.000
scaffold806-EXSNAP2012.4 Pristionchus exspectatus scaffold806-EXSNAP2012.4 N 0.000
scaffold861-EXSNAP2012.4 Pristionchus exspectatus scaffold861-EXSNAP2012.4 N 0.000
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.000