CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc14081
(
Meloidogyne incognita
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Minc14081
T335287_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc14081
Sox
20
88
PDRPLTPYMRYSKKVWPEVRAENPDSPLWDFGRIIGQLWNNLPPAEKLVYQQEYEVEKSKYEEAVKNYN
Links
Other
Sox
family TFs
Other
Meloidogyne incognita
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA005529
Oryza indica
BGIOSGA005529
N
0.000
OB02G22230
Oryza brachyantha
OB02G22230
N
0.000
OB02G40970
Oryza brachyantha
OB02G40970
N
0.000
OBART02G34090
Oryza barthii
OBART02G34090
N
0.000
OGLUM02G35260
Oryza glumaepatula
OGLUM02G35260
N
0.000
OLONG_015651
Oryza longistaminata
OLONG_015651
N
0.000
OMERI02G32430
Oryza meridionalis
OMERI02G32430
N
0.000
ONIVA02G36150
Oryza nivara
ONIVA02G36150
N
0.000
OPUNC02G31510
Oryza punctata
OPUNC02G31510
N
0.000
ORGLA02G0295100
Oryza glaberrima
ORGLA02G0295100
N
0.000
ORUFI02G35630
Oryza rufipogon
ORUFI02G35630
N
0.000
OS02G0771200
Oryza sativa
OS02G0771200
N
0.000
Pavir.J00866
Panicum virgatum
Pavir.J00866
N
0.000