CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002491904.1
(
Pichia pastoris
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
XP_002491904.1
T335362_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002491904.1
Sox
93
166
PKKPLTMYFAYSALARKEIMEERARKGLPPLSSLEMTHETSKKWKDLPSEERDEWKRKYNEELELYQHEKDRYI
Links
Other
Sox
family TFs
Other
Pichia pastoris
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_03369
Aspergillus nidulans
CADANIAG00009673
N
ATEG_08685
Aspergillus terreus
CADATEAG00006707
N
e_gw1.00868.19.1
Aspergillus carbonarius
e_gw1.00868.19.1
N
UREG_02380
Uncinocarpus reesii
UREG_02380
N