CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ASU_02248
(
Ascaris suum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
ASU_02248
T336057_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ASU_02248
Sox
66
134
PDRPLVPYMRFSRKMWAKVRSEHPDSQLWDIGKVIGQMWRDAPESEKAIYQQEYEIEKTEYEKALKAYH
Links
Other
Sox
family TFs
Other
Ascaris suum
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA013533
Oryza indica
BGIOSGA013533
N
0.000
BHLH148
Oryza sativa
OS03G0741100
N
0.000
BRADI1G09177
Brachypodium distachyon
BRADI1G09177
N
0.000
GSMUA_Achr3G29320_001
Musa acuminata
GSMUA_Achr3G29320_001
N
0.000
GSMUA_Achr4G11160_001
Musa acuminata
GSMUA_Achr4G11160_001
N
0.000
MLOC_74977
Hordeum vulgare
MLOC_74977
N
0.000
OB03G40700
Oryza brachyantha
OB03G40700
N
0.000
OBART03G33610
Oryza barthii
OBART03G33610
N
0.000
OGLUM03G33270
Oryza glumaepatula
OGLUM03G33270
N
0.000
OLONG_003946
Oryza longistaminata
OLONG_003946
N
0.000
OMERI03G31010
Oryza meridionalis
OMERI03G31010
N
0.000
ONIVA10G02990
Oryza nivara
ONIVA10G02990
N
0.000
OPUNC03G30800
Oryza punctata
OPUNC03G30800
N
0.000
ORGLA03G0304100
Oryza glaberrima
ORGLA03G0304100
N
0.000
ORUFI03G34980
Oryza rufipogon
ORUFI03G34980
N
0.000
Pavir.Ia00623
Panicum virgatum
Pavir.Ia00623
N
0.000
Pavir.J38335
Panicum virgatum
Pavir.J38335
N
0.000
PDK_20s1685261g001
Phoenix dactylifera
PDK_20s1685261g001
N
0.000
Sb01g008570
Sorghum bicolor
Sb01g008570
N
0.000
Si036716m.g
Setaria italica
Si036716m.g
N
0.000
Traes_5BL_39FD9626E
Triticum aestivum
Traes_5BL_39FD9626E
N
0.000
Traes_5DL_2A286B481
Triticum aestivum
Traes_5DL_2A286B481
N
0.000