csin103376 (Clonorchis sinensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 csin103376 T336117_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
csin103376 Sox 1 64

Links

Other Sox family TFs
Other Clonorchis sinensis TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29717.m000222 Ricinus communis 29717.m000222 I 0.000
29820.m001029 Ricinus communis 29820.m001029 I 0.000
AMTR_s00023p00102530 Amborella trichopoda AMTR_s00023p00102530 I 0.000
AMTR_s00089p00116340 Amborella trichopoda AMTR_s00089p00116340 I 0.000
Aquca_005_00209 Aquilegia coerulea Aquca_005_00209 I 0.000
Aquca_016_00233 Aquilegia coerulea Aquca_016_00233 I 0.000
Aquca_058_00185 Aquilegia coerulea Aquca_058_00185 I 0.000
BGIOSGA017876 Oryza indica BGIOSGA017876 I 0.000
BGIOSGA019646 Oryza indica BGIOSGA019646 I 0.000
BGIOSGA026734 Oryza indica BGIOSGA026734 I 0.000
BGIOSGA027300 Oryza indica BGIOSGA027300 I 0.000
Bo3g032500 Brassica oleracea Bo3g032500 I 0.000
Bo4g027280 Brassica oleracea Bo4g027280 I 0.000
Bo4g187630 Brassica oleracea Bo4g187630 I 0.000
Bo8g065800 Brassica oleracea Bo8g065800 I 0.000
Bostr.13671s0059 Boechera stricta Bostr.13671s0059 I 0.000
Bostr.23794s0221 Boechera stricta Bostr.23794s0221 I 0.000
Bra000064 Brassica rapa Bra000064 I 0.000
Bra005104 Brassica rapa Bra005104 I 0.000
Bra017117 Brassica rapa Bra017117 I 0.000
Bra019697 Brassica rapa Bra019697 I 0.000
Bra026554 Brassica rapa Bra026554 I 0.000
Bra026869 Brassica rapa Bra026869 I 0.000
BRADI2G00280 Brachypodium distachyon BRADI2G00280 I 0.000
BRADI2G53760 Brachypodium distachyon BRADI2G53760 I 0.000
BRADI3G19640 Brachypodium distachyon BRADI3G19640 I 0.000
BRADI3G39340 Brachypodium distachyon BRADI3G39340 I 0.000
BRADI4G01950 Brachypodium distachyon BRADI4G01950 I 0.000
Cagra.16435s0012 Capsella grandiflora Cagra.16435s0012 I 0.000
Cagra.2692s0006 Capsella grandiflora Cagra.2692s0006 I 0.000
Cagra.3501s0106 Capsella grandiflora Cagra.3501s0106 I 0.000
Carubv10008859m.g Capsella rubella Carubv10008859m.g I 0.000
Carubv10023006m.g Capsella rubella Carubv10023006m.g I 0.000
cassava1059.valid.m1 Manihot esculenta cassava1059.valid.m1 I 0.000
cassava22187.valid.m1 Manihot esculenta cassava22187.valid.m1 I 0.000
cassava22188.valid.m1 Manihot esculenta cassava22188.valid.m1 I 0.000
cassava24475.valid.m1 Manihot esculenta cassava24475.valid.m1 I 0.000
cassava42912.valid.m1 Manihot esculenta cassava42912.valid.m1 I 0.000
Ca_03331 Cicer arietinum Ca_03331 I 0.000
Ca_06124 Cicer arietinum Ca_06124 I 0.000
Ca_08975 Cicer arietinum Ca_08975 I 0.000
Ca_09442 Cicer arietinum Ca_09442 I 0.000
Ca_17273 Cicer arietinum Ca_17273 I 0.000
Ca_22090 Cicer arietinum Ca_22090 I 0.000
chr1.CM1413.90.nd Lotus japonicus chr1.CM1413.90.nd I 0.000
chr2.CM0058.50.nc Lotus japonicus chr2.CM0058.50.nc I 0.000
chr4.CM0179.130.nc Lotus japonicus chr4.CM0179.130.nc I 0.000
Ciclev10000654m.g Citrus clementina Ciclev10000654m.g I 0.000
Ciclev10011386m.g Citrus clementina Ciclev10011386m.g I 0.000
Cla008232 Citrullus lanatus Cla008232 I 0.000
Cla009715 Citrullus lanatus Cla009715 I 0.000
Cla018303 Citrullus lanatus Cla018303 I 0.000
Cucsa.093390 Cucumis sativus Cucsa.093390 I 0.000
Cucsa.111910 Cucumis sativus Cucsa.111910 I 0.000
Cucsa.176780 Cucumis sativus Cucsa.176780 I 0.000
Cucsa.356720 Cucumis sativus Cucsa.356720 I 0.000
Eucgr.B04010 Eucalyptus grandis Eucgr.B04010 I 0.000
Eucgr.C02481 Eucalyptus grandis Eucgr.C02481 I 0.000
Eucgr.C02545 Eucalyptus grandis Eucgr.C02545 I 0.000
evm.TU.supercontig_2.345 Carica papaya evm.TU.supercontig_2.345 I 0.000
evm.TU.supercontig_5.248 Carica papaya evm.TU.supercontig_5.248 I 0.000
F775_09872 Aegilops tauschii F775_09872 I 0.000
F775_19284 Aegilops tauschii F775_19284 I 0.000
F775_28497 Aegilops tauschii F775_28497 I 0.000
fgenesh2_kg.1__1511__AT1G13960.1 Arabidopsis lyrata fgenesh2_kg.1__1511__AT1G13960.1 I 0.000
gene10079-v1.0-hybrid Fragaria vesca gene10079-v1.0-hybrid I 0.000
gene13803-v1.0-hybrid Fragaria vesca gene13803-v1.0-hybrid I 0.000
gene16807-v1.0-hybrid Fragaria vesca gene16807-v1.0-hybrid I 0.000
gene28174-v1.0-hybrid Fragaria vesca gene28174-v1.0-hybrid I 0.000
GLYMA02G36510 Glycine max GLYMA02G36510 I 0.000
GLYMA02G39870 Glycine max GLYMA02G39870 I 0.000
GLYMA08G26230 Glycine max GLYMA08G26230 I 0.000
GLYMA09G38581 Glycine max GLYMA09G38581 I 0.000
GLYMA11G29720 Glycine max GLYMA11G29720 I 0.000
GLYMA14G38010 Glycine max GLYMA14G38010 I 0.000
GLYMA17G08170 Glycine max GLYMA17G08170 I 0.000
GLYMA18G06360 Glycine max GLYMA18G06360 I 0.000
GLYMA18G47741 Glycine max GLYMA18G47741 I 0.000
GLYMA18G49830 Glycine max GLYMA18G49830 I 0.000
Gorai.003G150700 Gossypium raimondii Gorai.003G150700 I 0.000
Gorai.012G028200 Gossypium raimondii Gorai.012G028200 I 0.000
Gorai.012G119600 Gossypium raimondii Gorai.012G119600 I 0.000
Gorai.013G179400 Gossypium raimondii Gorai.013G179400 I 0.000
GRMZM2G012724 Zea mays GRMZM2G012724 I 0.000
GRMZM2G148087 Zea mays GRMZM2G148087 I 0.000
GRMZM2G449681 Zea mays GRMZM2G449681 I 0.000
GRMZM2G549512 Zea mays GRMZM2G549512 I 0.000
GSMUA_Achr10G06060_001 Musa acuminata GSMUA_Achr10G06060_001 I 0.000
GSMUA_Achr11G10700_001 Musa acuminata GSMUA_Achr11G10700_001 I 0.000
GSMUA_Achr4G01600_001 Musa acuminata GSMUA_Achr4G01600_001 I 0.000
GSMUA_Achr8G01790_001 Musa acuminata GSMUA_Achr8G01790_001 I 0.000
GSMUA_Achr9G19580_001 Musa acuminata GSMUA_Achr9G19580_001 I 0.000
GSMUA_AchrUn_randomG13180_001 Musa acuminata GSMUA_AchrUn_randomG13180_001 I 0.000
LjSGA_014003.1 Lotus japonicus LjSGA_014003.1 I 0.000
LjSGA_020468.1 Lotus japonicus LjSGA_020468.1 I 0.000
LPERR01G30770 Leersia perrieri LPERR01G30770 I 0.000
LPERR05G09800 Leersia perrieri LPERR05G09800 I 0.000
LPERR05G15940 Leersia perrieri LPERR05G15940 I 0.000
LPERR08G07770 Leersia perrieri LPERR08G07770 I 0.000
LPERR08G16240 Leersia perrieri LPERR08G16240 I 0.000
LPERR09G10410 Leersia perrieri LPERR09G10410 I 0.000
Lus10001265.g Linum usitatissimum Lus10001265.g I 0.000
Lus10012215.g Linum usitatissimum Lus10012215.g I 0.000
Lus10020215.g Linum usitatissimum Lus10020215.g I 0.000
Lus10026838.g Linum usitatissimum Lus10026838.g I 0.000
Lus10042243.g Linum usitatissimum Lus10042243.g I 0.000
MDP0000131218 Malus domestica MDP0000131218 I 0.000
MDP0000144203 Malus domestica MDP0000144203 I 0.000
MDP0000184044 Malus domestica MDP0000184044 I 0.000
MDP0000195385 Malus domestica MDP0000195385 I 0.000
MDP0000293456 Malus domestica MDP0000293456 I 0.000
MDP0000296025 Malus domestica MDP0000296025 I 0.000
MDP0000431358 Malus domestica MDP0000431358 I 0.000
MDP0000507805 Malus domestica MDP0000507805 I 0.000
MDP0000514115 Malus domestica MDP0000514115 I 0.000
MDP0000648338 Malus domestica MDP0000648338 I 0.000
MDP0000708692 Malus domestica MDP0000708692 I 0.000
MDP0000935996 Malus domestica MDP0000935996 I 0.000
mgf001151m Mimulus guttatus mgf001151m I 0.000
mgf003063m Mimulus guttatus mgf003063m I 0.000
MLOC_58019 Hordeum vulgare MLOC_58019 I 0.000
MTR_3g009470 Medicago truncatula MTR_3g009470 I 0.000
MTR_3g031220 Medicago truncatula MTR_3g031220 I 0.000
MTR_4g013260 Medicago truncatula MTR_4g013260 I 0.000
MTR_5g074400 Medicago truncatula MTR_5g074400 I 0.000
MTR_7g011820 Medicago truncatula MTR_7g011820 I 0.000
MTR_7g071120 Medicago truncatula MTR_7g071120 I 0.000
OB01G44510 Oryza brachyantha OB01G44510 I 0.000
OB05G20640 Oryza brachyantha OB05G20640 I 0.000
OB08G17980 Oryza brachyantha OB08G17980 I 0.000
OB09G20760 Oryza brachyantha OB09G20760 I 0.000
OBART05G12450 Oryza barthii OBART05G12450 I 0.000
OBART05G20030 Oryza barthii OBART05G20030 I 0.000
OBART08G08630 Oryza barthii OBART08G08630 I 0.000
OBART08G19340 Oryza barthii OBART08G19340 I 0.000
OGLUM05G13190 Oryza glumaepatula OGLUM05G13190 I 0.000
OGLUM05G21120 Oryza glumaepatula OGLUM05G21120 I 0.000
OGLUM08G09260 Oryza glumaepatula OGLUM08G09260 I 0.000
OGLUM08G20430 Oryza glumaepatula OGLUM08G20430 I 0.000
OLONG_000666 Oryza longistaminata OLONG_000666 I 0.000
OLONG_005331 Oryza longistaminata OLONG_005331 I 0.000
OLONG_021907 Oryza longistaminata OLONG_021907 I 0.000
OLONG_024935 Oryza longistaminata OLONG_024935 I 0.000
OMERI01G32840 Oryza meridionalis OMERI01G32840 I 0.000
OMERI05G17590 Oryza meridionalis OMERI05G17590 I 0.000
OMERI08G15980 Oryza meridionalis OMERI08G15980 I 0.000
ONIVA01G40720 Oryza nivara ONIVA01G40720 I 0.000
ONIVA05G13190 Oryza nivara ONIVA05G13190 I 0.000
ONIVA05G21150 Oryza nivara ONIVA05G21150 I 0.000
ONIVA08G09380 Oryza nivara ONIVA08G09380 I 0.000
ONIVA08G21410 Oryza nivara ONIVA08G21410 I 0.000
OPUNC01G34610 Oryza punctata OPUNC01G34610 I 0.000
OPUNC05G10620 Oryza punctata OPUNC05G10620 I 0.000
OPUNC05G17740 Oryza punctata OPUNC05G17740 I 0.000
OPUNC08G08120 Oryza punctata OPUNC08G08120 I 0.000
OPUNC08G17390 Oryza punctata OPUNC08G17390 I 0.000
orange1.1g011483m.g Citrus sinensis orange1.1g011483m.g I 0.000
orange1.1g013222m.g Citrus sinensis orange1.1g013222m.g I 0.000
ORGLA01G0295600 Oryza glaberrima ORGLA01G0295600 I 0.000
ORGLA05G0106500 Oryza glaberrima ORGLA05G0106500 I 0.000
ORGLA08G0170100 Oryza glaberrima ORGLA08G0170100 I 0.000
ORUFI01G39110 Oryza rufipogon ORUFI01G39110 I 0.000
ORUFI05G21270 Oryza rufipogon ORUFI05G21270 I 0.000
ORUFI08G09900 Oryza rufipogon ORUFI08G09900 I 0.000
ORUFI08G21630 Oryza rufipogon ORUFI08G21630 I 0.000
ORUFI09G08210 Oryza rufipogon ORUFI09G08210 I 0.000
OS05G0343400 Oryza sativa OS05G0343400 I 0.000
OS05G0474800 Oryza sativa OS05G0474800 I 0.000
OS08G0499300 Oryza sativa OS08G0499300 I 0.000
Pavir.Ca01475 Panicum virgatum Pavir.Ca01475 I 0.000
Pavir.Ea03280 Panicum virgatum Pavir.Ea03280 I 0.000
Pavir.Eb03590 Panicum virgatum Pavir.Eb03590 I 0.000
Pavir.Fa01340 Panicum virgatum Pavir.Fa01340 I 0.000
Pavir.Fb01409 Panicum virgatum Pavir.Fb01409 I 0.000
Pavir.J35763 Panicum virgatum Pavir.J35763 I 0.000
PDK_20s13009494g002 Phoenix dactylifera PDK_20s13009494g002 I 0.000
PDK_20s1360721g002 Phoenix dactylifera PDK_20s1360721g002 I 0.000
PGSC0003DMG400011633 Solanum tuberosum PGSC0003DMG400011633 I 0.000
PGSC0003DMG400016769 Solanum tuberosum PGSC0003DMG400016769 I 0.000
PGSC0003DMG400028335 Solanum tuberosum PGSC0003DMG400028335 I 0.000
PK16045.1 Cannabis sativa PK16045.1 I 0.000
PK20695.1 Cannabis sativa PK20695.1 I 0.000
Pm000163 Prunus mume Pm000163 I 0.000
Pm003697 Prunus mume Pm003697 I 0.000
Pm027732 Prunus mume Pm027732 I 0.000
Pm029293 Prunus mume Pm029293 I 0.000
POPTR_0001s47670 Populus trichocarpa POPTR_0001s47670 I 0.000
POPTR_0006s10600 Populus trichocarpa POPTR_0006s10600 I 0.000
POPTR_0013s14960 Populus trichocarpa POPTR_0013s14960 I 0.000
POPTR_0016s13600 Populus trichocarpa POPTR_0016s13600 I 0.000
POPTR_0019s14460 Populus trichocarpa POPTR_0019s14460 I 0.000
PRUPE_ppa003333mg Prunus persica PRUPE_ppa003333mg I 0.000
PRUPE_ppa004009mg Prunus persica PRUPE_ppa004009mg I 0.000
PRUPE_ppa004042mg Prunus persica PRUPE_ppa004042mg I 0.000
PRUPE_ppb022557mg Prunus persica PRUPE_ppb022557mg I 0.000
Q40090_IPOBA Ipomoea batatas Q40090_IPOBA D 0.000
SapurV1A.0001s0200 Salix purpurea SapurV1A.0001s0200 I 0.000
SapurV1A.0222s0350 Salix purpurea SapurV1A.0222s0350 I 0.000
SapurV1A.0433s0130 Salix purpurea SapurV1A.0433s0130 I 0.000
SapurV1A.0466s0170 Salix purpurea SapurV1A.0466s0170 I 0.000
Sb03g038510 Sorghum bicolor Sb03g038510 I 0.000
Sb07g016330 Sorghum bicolor Sb07g016330 I 0.000
Sb09g015900 Sorghum bicolor Sb09g015900 I 0.000
Si000906m.g Setaria italica Si000906m.g I 0.000
Si013374m.g Setaria italica Si013374m.g I 0.000
Si013488m.g Setaria italica Si013488m.g I 0.000
Si021956m.g Setaria italica Si021956m.g I 0.000
Solyc06g066370.2 Solanum lycopersicum Solyc06g066370.2 I 0.000
Solyc09g014990.2 Solanum lycopersicum Solyc09g014990.2 I 0.000
TCM_021580 Theobroma cacao TCM_021580 I 0.000
TCM_025248 Theobroma cacao TCM_025248 I 0.000
TCM_042240 Theobroma cacao TCM_042240 I 0.000
Thhalv10007428m.g Eutrema salsugineum Thhalv10007428m.g I 0.000
Thhalv10016542m.g Eutrema salsugineum Thhalv10016542m.g I 0.000
Traes_1AS_F3EAEC435 Triticum aestivum Traes_1AS_F3EAEC435 I 0.000
Traes_1BS_EF67E5A24 Triticum aestivum Traes_1BS_EF67E5A24 I 0.000
Traes_1DS_A6733B734 Triticum aestivum Traes_1DS_A6733B734 I 0.000
Traes_5AL_ED3ADED51 Triticum aestivum Traes_5AL_ED3ADED51 I 0.000
Traes_5BL_17A712C94 Triticum aestivum Traes_5BL_17A712C94 I 0.000
Traes_5DL_21F7C6BF7 Triticum aestivum Traes_5DL_21F7C6BF7 I 0.000
Traes_7AL_48C81DE03 Triticum aestivum Traes_7AL_48C81DE03 I 0.000
Traes_7AL_48C81DE031 Triticum aestivum Traes_7AL_48C81DE031 I 0.000
Traes_7BL_A46F1A830 Triticum aestivum Traes_7BL_A46F1A830 I 0.000
Traes_7DS_24C563960 Triticum aestivum Traes_7DS_24C563960 I 0.000
TRIUR3_02376 Triticum urartu TRIUR3_02376 I 0.000
TRIUR3_09462 Triticum urartu TRIUR3_09462 I 0.000
TRIUR3_24481 Triticum urartu TRIUR3_24481 I 0.000
VIT_06s0004g07500 Vitis vinifera VIT_06s0004g07500 I 0.000
WRKY24 Oryza indica BGIOSGA004722 I 0.000
WRKY24 Oryza sativa OS01G0826400 I 0.000
WRKY32 Vitis vinifera VIT_11s0037g00150 I 0.000
WRKY33 Arabidopsis thaliana AT2G38470 D 0.000
WRKY33 Arabidopsis lyrata fgenesh2_kg.4__1917__AT2G38470.1 I 0.000
WRKY4 Arabidopsis thaliana AT1G13960 I 0.000
WRKY58 Vitis vinifera VIT_14s0108g01280 I 0.000